HNRNPK (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000006005 T19604_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
hnRNPK
M026_0.6 		Homo sapiens CCAWMCC RNAcompete
Ray et al.(2013)
RNCMPT00026 		0.915
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001450 KH 44 104
ENSTNIP00000001450 KH 147 210
ENSTNIP00000001450 KH 410 472
ENSTNIP00000008745 KH 44 104
ENSTNIP00000008745 KH 122 185
ENSTNIP00000008745 KH 385 447

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPK Takifugu rubripes ENSTRUG00000010659 I 1.000
HNRNPK Gasterosteus aculeatus ENSGACG00000007581 I 0.963
HNRNPK Oryzias latipes ENSORLG00000005161 I 0.957
HNRNPK Tursiops truncatus ENSTTRG00000016693 I 0.920
hnrpkl Danio rerio ENSDARG00000007034 I 0.920
HNRPK_BOVIN Bos taurus ENSBTAG00000021131 I 0.920
HNRNPK Monodelphis domestica ENSMODG00000018992 I 0.915
ENSMODG00000008402 Monodelphis domestica ENSMODG00000008402 I 0.915
HNRNPK Gorilla gorilla ENSGGOG00000015500 I 0.915
HNRNPK Macropus eugenii ENSMEUG00000006975 I 0.915
ENSMMUG00000018871 Macaca mulatta ENSMMUG00000018871 I 0.915
HNRNPK Ornithorhynchus anatinus ENSOANG00000014612 I 0.915
HNRNPK Pan troglodytes ENSPTRG00000021061 I 0.915
Hnrnpk Rattus norvegicus ENSRNOG00000019113 I 0.915
HNRNPK Taeniopygia guttata ENSTGUG00000003138 I 0.915
ENSPPYG00000019327 Pongo pygmaeus ENSPPYG00000019327 I 0.915
HNRNPK Otolemur garnettii ENSOGAG00000007478 I 0.915
hnRNPK Homo sapiens ENSG00000165119 D 0.915
HNRPK_RABIT Oryctolagus cuniculus ENSOCUG00000010364 I 0.915
Hnrnpk Mus musculus ENSMUSG00000021546 I 0.915
HNRNPK Gallus gallus ENSGALG00000012591 I 0.915
HNRNPK Tarsius syrichta ENSTSYG00000001196 I 0.915
HNRNPK Choloepus hoffmanni ENSCHOG00000010832 I 0.915
Ame_R002812 Ailuropoda melanoleuca Ame_R002812 I 0.915
hnrnpk Danio rerio ENSDARG00000018914 I 0.915
HNRNPK Equus caballus ENSECAG00000025104 I 0.915
HNRNPK Callithrix jacchus ENSCJAG00000003750 I 0.915
HNRNPK Echinops telfairi ENSETEG00000016294 I 0.910
HNRNPK Anolis carolinensis ENSACAG00000001479 I 0.910
HNRNPK Loxodonta africana ENSLAFG00000026567 I 0.910
HNRPK_CHICK Gallus gallus ENSGALG00000014366 I 0.910
HNRNPK Erinaceus europaeus ENSEEUG00000014624 I 0.910
AAH44711 Xenopus laevis AAH44711 I 0.904
ENSTTRG00000004906 Tursiops truncatus ENSTTRG00000004906 I 0.904
Gm7964 Mus musculus ENSMUSG00000063902 I 0.904
HNRNPK Tupaia belangeri ENSTBEG00000001289 I 0.899
HNRNPK Takifugu rubripes ENSTRUG00000000535 I 0.899
AAB26047 Xenopus laevis AAB26047 I 0.899
XM_533511.2 Canis familiaris ENSCAFG00000001399 I 0.894
hnrnpk Xenopus tropicalis ENSXETG00000011722 I 0.883
XM_855974.1 Canis familiaris ENSCAFG00000017503 I 0.878
HNRNPK Felis catus ENSFCAG00000014862 I 0.867
ENSPPYG00000013626 Pongo pygmaeus ENSPPYG00000013626 I 0.862
HNRNPK Pteropus vampyrus ENSPVAG00000009078 I 0.862
ENSOCUG00000025925 Oryctolagus cuniculus ENSOCUG00000025925 I 0.846
D3ZJL5_RAT Rattus norvegicus ENSRNOG00000029014 I 0.803
ENSRNOG00000013016 Rattus norvegicus ENSRNOG00000013016 I 0.803
HNRNPK Oryzias latipes ENSORLG00000004704 I 0.798
HNRNPK Tetraodon nigroviridis ENSTNIG00000007554 I 0.761
HNRNPK Procavia capensis ENSPCAG00000016196 I 0.761
HNRNPK Ochotona princeps ENSOPRG00000015723 I 0.761
ENSCPOG00000005024 Cavia porcellus ENSCPOG00000005024 I 0.761