CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XM_855974.1
(
Canis familiaris
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCAFG00000017503
T18479_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.963
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000033805
KH
44
104
ELRILLQSKNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIETIGEILKKI
ENSCAFP00000033805
KH
146
209
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECIKII
ENSCAFP00000033805
KH
389
451
TTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEGSEDRVITITGTQDQIQNAPYLL
Links
Other
KH
family RBPs
Other
Canis familiaris
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.963
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.963
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.963
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.963
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.963
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.963
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.963
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.963
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.963
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.963
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.963
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.963
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.963
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.963
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.963
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.963
hnRNPK
Homo sapiens
ENSG00000165119
D
0.963
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.963
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.963
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.963
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.957
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.957
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.957
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.957
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.957
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.957
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.957
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.947
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.941
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.941
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.941
AAH44711
Xenopus laevis
AAH44711
I
0.936
AAB26047
Xenopus laevis
AAB26047
I
0.936
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.926
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.920
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.910
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.910
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.904
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.899
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.899
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.894
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.883
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.878
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.878
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.867
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.835
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.830
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.798
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.787
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.787
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.771
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.761