CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSOCUG00000021452
(
Oryctolagus cuniculus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOCUG00000021452
T19203_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
PCBP2
M043_0.6
Homo sapiens
CCYYCCH
RNAcompete
Ray et al.(2013)
RNCMPT00044
0.749
pcbp2
M211_0.6
Danio rerio
WWUCCC
RNAcompete
Ray et al.(2013)
RNCMPT00246
0.712
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000021519
KH
22
75
GKEVGSVIRKKGESVKKMHQESGASTNISDRNCLESIITLAGPTNAIFKAFAMI
ENSOCUP00000021519
KH
99
161
TLRLVVPASQCGSPIGKIKEIQESTGAQVQVAGDMLPNSTEWAIAIAGIPQSIMEYINQICMI
ENSOCUP00000021519
KH
237
295
SHESTIPKDLIGCIVGHQGATINMSAAQIKISNSVEGSTDRQVTITRSYASISLSQYQI
Links
Other
KH
family RBPs
Other
Oryctolagus cuniculus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP2
Macaca mulatta
ENSMMUG00000006608
I
0.769
PCBP2
Tarsius syrichta
ENSTSYG00000009771
I
0.766
PCBP2
Gorilla gorilla
ENSGGOG00000012613
I
0.749
PCBP2
Homo sapiens
ENSG00000197111
D
0.749
ENSLAFG00000013187
Loxodonta africana
ENSLAFG00000013187
I
0.749
PCBP2
Equus caballus
ENSECAG00000022389
I
0.749
PCBP2
Dasypus novemcinctus
ENSDNOG00000008688
I
0.749
PCBP2
Canis familiaris
ENSCAFG00000006821
I
0.749
ENSCPOG00000000967
Cavia porcellus
ENSCPOG00000000967
I
0.749
Q3SYT9_BOVIN
Bos taurus
ENSBTAG00000020757
I
0.749
ENSACAG00000000783
Anolis carolinensis
ENSACAG00000000783
I
0.749
ENSOCUG00000022490
Oryctolagus cuniculus
ENSOCUG00000022490
I
0.749
PCBP2
Tursiops truncatus
ENSTTRG00000017174
I
0.749
PCBP2
Microcebus murinus
ENSMICG00000011651
I
0.749
PCBP2
Procavia capensis
ENSPCAG00000005154
I
0.749
Pcbp2
Mus musculus
ENSMUSG00000056851
I
0.749
PCBP2
Ochotona princeps
ENSOPRG00000004680
I
0.749
ENSPPYG00000004581
Pongo pygmaeus
ENSPPYG00000004581
I
0.749
PCBP2
Pan troglodytes
ENSPTRG00000005018
I
0.749
ENSMODG00000000280
Monodelphis domestica
ENSMODG00000000280
I
0.749
PCBP2
Pteropus vampyrus
ENSPVAG00000012284
I
0.749
PCBP2
Sus scrofa
ENSSSCG00000000274
I
0.749
ENSMODG00000017748
Monodelphis domestica
ENSMODG00000017748
I
0.745
ENSCJAG00000034075
Callithrix jacchus
ENSCJAG00000034075
I
0.743
CAD29864
Xenopus laevis
CAD29864
I
0.738
LOC100392590
Callithrix jacchus
ENSCJAG00000018590
I
0.738
pcbp3
Xenopus tropicalis
ENSXETG00000012658
I
0.738
AAH84195
Xenopus laevis
AAH84195
I
0.738
AAH41241
Xenopus laevis
AAH41241
I
0.738
CAB50743
Xenopus laevis
CAB50743
I
0.738
LOC100409398
Callithrix jacchus
ENSCJAG00000007694
I
0.728
Ame_R011627
Ailuropoda melanoleuca
Ame_R011627
I
0.723
ENSORLG00000005176
Oryzias latipes
ENSORLG00000005176
I
0.717
ENSTRUG00000011419
Takifugu rubripes
ENSTRUG00000011419
I
0.715
PCBP1
Tetraodon nigroviridis
ENSTNIG00000012585
I
0.712
ENSTRUG00000009361
Takifugu rubripes
ENSTRUG00000009361
I
0.712
pcbp2
Danio rerio
ENSDARG00000013184
D
0.712
ENSGACG00000006681
Gasterosteus aculeatus
ENSGACG00000006681
I
0.707
ENSORLG00000012872
Oryzias latipes
ENSORLG00000012872
I
0.707