ENSTRUG00000009361 (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000009361 T19643_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.963
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.957
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.899
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.899
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.862
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023544 KH 15 75
ENSTRUP00000023544 KH 99 162
ENSTRUP00000023544 KH 289 351
ENSTRUP00000023545 KH 15 75
ENSTRUP00000023545 KH 99 162
ENSTRUP00000023545 KH 262 324
ENSTRUP00000023546 KH 27 87
ENSTRUP00000023546 KH 111 174
ENSTRUP00000023546 KH 301 363

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

124 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.995
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.989
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.973
pcbp2 Danio rerio ENSDARG00000013184 D 0.963
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.963
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.957
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.957
PCBP2 Homo sapiens ENSG00000197111 D 0.957
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.957
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.957
PCBP2 Equus caballus ENSECAG00000022389 I 0.957
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.957
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.957
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.957
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.957
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.957
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.957
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.957
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.957
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.957
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.957
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.957
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.957
AAH84195 Xenopus laevis AAH84195 I 0.957
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.957
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.957
CAB50743 Xenopus laevis CAB50743 I 0.957
CAD29864 Xenopus laevis CAD29864 I 0.957
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.957
AAH41241 Xenopus laevis AAH41241 I 0.957
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.957
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.952
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.952
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.947
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.941
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.910
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.899
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.899
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.899
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.899
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.899
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.899
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.899
PCBP1 Homo sapiens ENSG00000169564 D 0.899
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.899
LOC100050579 Equus caballus ENSECAG00000002544 I 0.899
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.899
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.899
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.888
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.883
PCBP3 Gallus gallus ENSGALG00000013155 I 0.878
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.878
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.878
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.872
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.872
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.867
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.862
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.862
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.862
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.862
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.862
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.862
PCBP3 Homo sapiens ENSG00000183570 I 0.862
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.862
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.862
LOC100050101 Equus caballus ENSECAG00000012413 I 0.862
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.862
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.862
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.862
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.862
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.862
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.856
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.856
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.853
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.851
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.851
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.851
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.846
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.841
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.836
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.830
PCBP3 Gallus gallus ENSGALG00000004394 I 0.824
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.820
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.819
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.819
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.812
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.793
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.782
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.777
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.777
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.771
pcbp3 Danio rerio ENSDARG00000054378 I 0.766
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.766
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.766
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.761
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.753
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.751
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.741
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.735
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.735
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.735
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.730
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.729
PCBP3 Felis catus ENSFCAG00000014812 I 0.729
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.726
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.720
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.720
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.718
ENSOCUG00000021452 Oryctolagus cuniculus ENSOCUG00000021452 I 0.712
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.711
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.705
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.700
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.700
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.700
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.700
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.700
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.700
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.700
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.700
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.700
PCBP4 Homo sapiens ENSG00000090097 I 0.700
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.700
LOC100060660 Equus caballus ENSECAG00000024218 I 0.700