ENSTRUG00000011419 (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000011419 T19648_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.963
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.936
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.878
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.878
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.851
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000028843 KH 15 75
ENSTRUP00000028843 KH 99 162
ENSTRUP00000028843 KH 272 334
ENSTRUP00000028844 KH 15 75
ENSTRUP00000028844 KH 99 162
ENSTRUP00000028844 KH 256 318
ENSTRUP00000028845 KH 1 56
ENSTRUP00000028845 KH 80 143
ENSTRUP00000028845 KH 226 288

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.979
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.968
pcbp2 Danio rerio ENSDARG00000013184 D 0.963
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.941
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.936
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.936
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.936
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.936
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.936
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.936
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.936
PCBP2 Homo sapiens ENSG00000197111 D 0.936
PCBP2 Equus caballus ENSECAG00000022389 I 0.936
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.936
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.936
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.936
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.936
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.936
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.936
AAH41241 Xenopus laevis AAH41241 I 0.936
AAH84195 Xenopus laevis AAH84195 I 0.936
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.936
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.936
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.936
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.936
CAB50743 Xenopus laevis CAB50743 I 0.936
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.936
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.936
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.936
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.936
CAD29864 Xenopus laevis CAD29864 I 0.936
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.936
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.931
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.926
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.920
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.913
PCBP1 Homo sapiens ENSG00000169564 D 0.878
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.878
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.878
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.878
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.878
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.878
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.878
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.878
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.878
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.878
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.878
LOC100050579 Equus caballus ENSECAG00000002544 I 0.878
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.872
PCBP3 Gallus gallus ENSGALG00000013155 I 0.867
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.867
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.862
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.862
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.862
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.858
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.854
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.851
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.851
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.851
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.851
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.851
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.851
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.851
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.851
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.851
PCBP3 Homo sapiens ENSG00000183570 I 0.851
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.851
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.851
LOC100050101 Equus caballus ENSECAG00000012413 I 0.851
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.851
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.846
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.846
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.843
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.840
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.840
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.840
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.840
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.835
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.831
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.825
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.824
PCBP3 Gallus gallus ENSGALG00000004394 I 0.814
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.814
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.804
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.801
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.798
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.792
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.782
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.781
pcbp3 Danio rerio ENSDARG00000054378 I 0.776
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.776
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.776
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.770
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.761
PCBP3 Felis catus ENSFCAG00000014812 I 0.743
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.743
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.742
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.741
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.741
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.740
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.737
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.735
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.735
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.730
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.721
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.720
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.716
ENSOCUG00000021452 Oryctolagus cuniculus ENSOCUG00000021452 I 0.715
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.713
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.711
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.711
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.711
PCBP4 Homo sapiens ENSG00000090097 I 0.711
LOC100060660 Equus caballus ENSECAG00000024218 I 0.711
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.711
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.711
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.711
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.711
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.711
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.711
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.711
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.705
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.704
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.704
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.700