Ame_R011627 (Ailuropoda melanoleuca)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Ame_R011627 T21593_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.899
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.856
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.835
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.835
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R011627 KH 1 45
Ame_R011627 KH 69 131
Ame_R011627 KH 255 317

Links

Other KH family RBPs
Other Ailuropoda melanoleuca RBPs

99 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.944
PCBP2 Homo sapiens ENSG00000197111 D 0.942
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.930
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.923
PCBP2 Equus caballus ENSECAG00000022389 I 0.899
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.899
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.899
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.899
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.899
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.899
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.899
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.899
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.899
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.899
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.899
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.899
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.899
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.899
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.899
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.899
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.899
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.899
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.899
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.894
AAH41241 Xenopus laevis AAH41241 I 0.883
CAB50743 Xenopus laevis CAB50743 I 0.883
AAH84195 Xenopus laevis AAH84195 I 0.883
CAD29864 Xenopus laevis CAD29864 I 0.883
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.883
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.862
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.860
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.858
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.856
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.856
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.856
pcbp2 Danio rerio ENSDARG00000013184 D 0.856
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.855
pcbp3 Danio rerio ENSDARG00000054378 I 0.855
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.849
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.846
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.843
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.843
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.840
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.835
LOC100050579 Equus caballus ENSECAG00000002544 I 0.835
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.835
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.835
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.835
PCBP1 Homo sapiens ENSG00000169564 D 0.835
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.835
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.835
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.835
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.835
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.835
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.835
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.835
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.819
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.814
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.809
PCBP3 Felis catus ENSFCAG00000014812 I 0.808
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.808
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.798
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.794
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.792
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.791
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.789
PCBP3 Gallus gallus ENSGALG00000013155 I 0.787
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.787
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.786
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.783
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.782
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.782
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.782
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.782
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.782
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.782
LOC100050101 Equus caballus ENSECAG00000012413 I 0.782
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.782
PCBP3 Homo sapiens ENSG00000183570 I 0.782
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.782
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.782
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.782
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.782
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.782
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.778
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.771
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.771
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.771
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.771
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.771
Pcbp2 Dipodomys ordii ENSDORG00000001384 I 0.762
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.755
PCBP3 Gallus gallus ENSGALG00000004394 I 0.745
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.741
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.739
ENSOCUG00000021452 Oryctolagus cuniculus ENSOCUG00000021452 I 0.723
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.718
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.708
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.707