CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_002154857.1
(
Hydra magnipapillata
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
XP_002154857.1
T22054_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002154857.1
KH
165
207
KRRQRLIGPNGATLKALELLTECYILVQGGTVSAIGSFKGLKQ
Links
Other
KH
family RBPs
Other
Hydra magnipapillata
RBPs
57 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.896
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.761
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.760
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.750
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.750
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.750
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.750
KRR1
Candida albicans
orf19.661
N
0.750
ENSETEG00000001656
Echinops telfairi
ENSETEG00000001656
N
0.745
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.745
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.740
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.740
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.740
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.729
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.729
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.720
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.720
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.720
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.720
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.720
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.720
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.720
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.720
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.720
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.700
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.700
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.700
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.700
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.700
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.700
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.700
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.700
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.700
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.700
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.700
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.700
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.700
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.700
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.700
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.700
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.700
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.700
PK22510.1
Cannabis sativa
PK22510.1
N
0.700
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.700
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.700
KRR1
Felis catus
ENSFCAG00000005207
N
0.700
KRR1
Homo sapiens
ENSG00000111615
N
0.700
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.700
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.700
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.700
KRR1
Sorex araneus
ENSSARG00000009967
N
0.700
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.700
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.700
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.700
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.700
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.700
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.700