CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMU_000450
(
Cryptosporidium muris
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CMU_000450
T20344_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMU_000450
KH
163
210
KRRQRLVGPNGSTLKAIELLTNCYILVQGQTVSVIGPYKGLKQVYRIV
Links
Other
KH
family RBPs
Other
Cryptosporidium muris
RBPs
126 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.30334
Cryptosporidium hominis
Chro.30334
N
0.878
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
0.878
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.800
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.800
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.800
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.800
KRR1
Candida albicans
orf19.661
N
0.792
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.792
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.792
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.792
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.792
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.792
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.780
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.780
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.780
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.780
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.780
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.780
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.780
TGME49_062070
Toxoplasma gondii
TGME49_062070
N
0.780
TGVEG_072780
Toxoplasma gondii
TGVEG_072780
N
0.780
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.780
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.780
NCLIV_025560
Neospora caninum
NCLIV_025560
N
0.780
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.780
TGGT1_008040
Toxoplasma gondii
TGGT1_008040
N
0.780
TP02_0631
Theileria parva
TP02_0631
N
0.776
EDO06615.1
Babesia bovis
EDO06615.1
N
0.771
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.771
CMR456C
Cyanidioschyzon merolae
CMR456C
N
0.771
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.760
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.760
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.760
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.760
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.760
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.760
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.760
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.760
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.760
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.760
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.760
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.760
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.760
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.760
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.760
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.760
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.760
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.760
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.755
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.750
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.745
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.745
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.740
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.740
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.740
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.740
GJ19628
Drosophila virilis
FBgn0206770
N
0.740
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.740
GL18627
Drosophila persimilis
FBgn0156228
N
0.740
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.740
GK24616
Drosophila willistoni
FBgn0226576
N
0.740
GE15854
Drosophila yakuba
FBgn0233416
N
0.740
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.740
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.740
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.740
GI18007
Drosophila mojavensis
FBgn0140747
N
0.740
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.740
dbe
Drosophila melanogaster
FBgn0020305
N
0.740
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.740
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.740
GG24622
Drosophila erecta
FBgn0116754
N
0.740
3707.m00252
Tetrahymena thermophila
3707.m00252
N
0.729
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.729
XP_002154857.1
Hydra magnipapillata
XP_002154857.1
N
0.729
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.725
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.720
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.720
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.720
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.720
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.720
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.720
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.720
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.720
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.720
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.720
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.720
KRR1
Sorex araneus
ENSSARG00000009967
N
0.720
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.720
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.720
KRR1
Homo sapiens
ENSG00000111615
N
0.720
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.720
UM03241
Ustilago maydis
UM03241
N
0.720
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.720
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.720
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.720
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.720
KRR1
Felis catus
ENSFCAG00000005207
N
0.720
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.720
MDP0000221204
Malus x domestica
MDP0000221204
N
0.720
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.720
MDP0000130613
Malus x domestica
MDP0000130613
N
0.720
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.720
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.720
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.720
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.720
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.720
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.720
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.720
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.720
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.720
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.720
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.717
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.706
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.706
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.700
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.700
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.700
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.700
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.700
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.700
Krr1
Mus musculus
ENSMUSG00000063334
N
0.700
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.700
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.700
AGAP007912
Anopheles gambiae
AGAP007912
N
0.700
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.700
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.700