SJAG_03853 (Schizosaccharomyces japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SJAG_03853 T30561_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SJAG_03853T0 RRM 122 190
SJAG_03853T0 RRM 206 275

Links

Other RRM family RBPs
Other Schizosaccharomyces japonicus RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPOG_01457 Schizosaccharomyces cryophilus SPOG_01457 N 0.950
SOCG_02545 Schizosaccharomyces octosporus SOCG_02545 N 0.942
SPBC660.15 Schizosaccharomyces pombe SPBC660.15 N 0.935
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.770
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.770
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.763
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.763
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.763
NCU12158 Neurospora crassa NCU12158 N 0.763
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.763
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.755
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.755
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.755
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.755
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.755
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.755
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.755
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.755
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.755
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.755
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.755
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.755
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.748
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.748
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.748
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.741
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.741
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.741
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.741
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.741
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.741
An02g14690 Aspergillus niger CADANGAG00002994 N 0.741
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.741
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.734
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.734
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.734
PredSwiss_ASS2010_857.1 Pneumocystis carinii PredSwiss_ASS2010_857.1 N 0.734
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.734
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.734
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.727
AB01113.1 Alternaria brassicicola AB01113.1 N 0.727
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.727
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.712
MCYG_04652 Microsporum canis MCYG_04652 N 0.712
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.712
TERG_03265 Trichophyton rubrum TERG_03265 N 0.712