SPOG_01457 (Schizosaccharomyces cryophilus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SPOG_01457 T30741_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SPOG_01457T0 RRM 161 229
SPOG_01457T0 RRM 245 314

Links

Other RRM family RBPs
Other Schizosaccharomyces cryophilus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SOCG_02545 Schizosaccharomyces octosporus SOCG_02545 N 0.986
SJAG_03853 Schizosaccharomyces japonicus SJAG_03853 N 0.950
SPBC660.15 Schizosaccharomyces pombe SPBC660.15 N 0.942
estExt_GeneWisePlus.C_210250 Trichoderma reesei estExt_GeneWisePlus.C_210250 N 0.770
estExt_fgenesh1_pg.C_40107 Trichoderma atroviride estExt_fgenesh1_pg.C_40107 N 0.763
MGG_06881 Magnaporthe oryzae MGG_06881 N 0.763
estExt_fgenesh1_pg.C_10265 Neurospora tetrasperma estExt_fgenesh1_pg.C_10265 N 0.755
CHGG_07099 Chaetomium globosum CHGG_07099 N 0.755
estExt_fgenesh3_pm.C_10926 Neurospora discreta estExt_fgenesh3_pm.C_10926 N 0.755
estExt_Genewise1Plus.C_230018 Trichoderma virens estExt_Genewise1Plus.C_230018 N 0.755
estExt_Genewise1Plus.C_70091 Cryphonectria parasitica estExt_Genewise1Plus.C_70091 N 0.755
NCU12158 Neurospora crassa NCU12158 N 0.755
Pa_2_12560 Podospora anserina Pa_2_12560 N 0.748
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.748
GLRG_03331 Colletotrichum graminicola GLRG_03331 N 0.748
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.748
FVEG_02942 Fusarium verticillioides FVEG_02942 N 0.748
FOXG_05191 Fusarium oxysporum FOXG_05191 N 0.748
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.748
FGSG_13728 Fusarium graminearum FGSG_13728 N 0.748
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.748
gw1.3.2310.1 Myceliophthora thermophila gw1.3.2310.1 N 0.748
estExt_Genewise1.C_23240 Thielavia terrestris estExt_Genewise1.C_23240 N 0.748
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.748
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.741
VDBG_00519 Verticillium albo atrum VDBG_00519 N 0.741
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.741
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.734
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.734
An02g14690 Aspergillus niger CADANGAG00002994 N 0.734
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.734
SS1G_05220 Sclerotinia sclerotiorum SS1G_05220 N 0.734
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.734
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.734
AFUA_2G06090 Aspergillus fumigatus CADAFUAG00003703 N 0.727
estExt_Genewise1Plus.C_240153 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_240153 N 0.727
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.727
e_gw1.5.1166.1 Nectria haematococca e_gw1.5.1166.1 N 0.727
MCYG_04652 Microsporum canis MCYG_04652 N 0.719
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.719
TERG_03265 Trichophyton rubrum TERG_03265 N 0.719
AB01113.1 Alternaria brassicicola AB01113.1 N 0.719
PredSwiss_ASS2010_857.1 Pneumocystis carinii PredSwiss_ASS2010_857.1 N 0.719
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.719
NFIA_082870 Neosartorya fischeri CADNFIAG00006872 N 0.719
ACLA_068230 Aspergillus clavatus CADACLAG00007015 N 0.712
TEQG_02438 Trichophyton equinum TEQG_02438 N 0.705