CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP007808
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP007808
T32530_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP007808-PA
RRM
1101
1165
IMLRNLTAQIEGSTLRTLCLQHGPVVNFHLYLNQGIALCKYGTREEAQKAQLALNNCQLGNTTII
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP007802
Anopheles gambiae
AGAP007802
N
0.815
CPIJ010645
Culex quinquefasciatus
CPIJ010645
N
0.800
CpipJ_CPIJ010645
Culex pipiens
CpipJ_CPIJ010645
N
0.800
GA16600-RA
Drosophila pseudoobscura
FBgn0076615
N
0.800
GL18179
Drosophila persimilis
FBgn0155782
N
0.800
GJ14351
Drosophila virilis
FBgn0201564
N
0.785
GG16439
Drosophila erecta
FBgn0108670
N
0.785
GF19039
Drosophila ananassae
FBgn0096051
N
0.785
AAEL007436
Aedes aegypti
AAEL007436
N
0.769
GH23931
Drosophila grimshawi
FBgn0131388
N
0.769
GK13697
Drosophila willistoni
FBgn0215705
N
0.769
GM26772
Drosophila sechellia
FBgn0181625
N
0.769
GD24374
Drosophila simulans
FBgn0195715
N
0.769
gw
Drosophila melanogaster
FBgn0051992
N
0.769
DGIL_AUG5s11561g1t1
Acyrtosiphon pisum
DGIL_AUG5s11561g1t1
N
0.754
GE14506
Drosophila yakuba
FBgn0232110
N
0.754
AAEL801228
Aedes aegypti
AAEL007447
N
0.754
BGIBMGA005589
Bombyx mori
BGIBMGA005589
N
0.738
PASA_GEN_0100279
Daphnia pulex
PASA_GEN_0100279
N
0.723
amel4_ncbi_hmm5263
Apis mellifera
amel4_ncbi_hmm5263
N
0.708