AT1G03457 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT1G03457-TAIR-G T32625_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT1G03457.1-P RRM 14 83
AT1G03457.1-P RRM 102 171
AT1G03457.1-P RRM 332 402
AT1G03457.2-P RRM 14 83
AT1G03457.2-P RRM 111 180
AT1G03457.2-P RRM 341 411

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002892115.1 Arabidopsis lyrata fgenesh2_kg.1__275__AT1G03457.2 N 0.953
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.793
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.793
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.791
29647.m002041 Ricinus communis 29647.m002041 N 0.787
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.777
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.763
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.763
PK12631.1 Cannabis sativa PK12631.1 N 0.763
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.763
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.758
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.754
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.749
ppa006027m Prunus persica ppa006027m N 0.739
MDP0000123673 Malus x domestica MDP0000123673 N 0.735
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.732
mgf007780m Mimulus guttatus mgf007780m N 0.731
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.730
MDP0000138865 Malus x domestica MDP0000138865 N 0.726
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.716
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.709