BRADI2G60300 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G60300 T33208_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G60300.1 RRM 31 100
BRADI2G60300.1 RRM 119 190
BRADI2G60300.1 RRM 366 436

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.920
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.887
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.873
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.869
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.864
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.850
SB09G018610 Sorghum bicolor Sb09g018610 N 0.845
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.840
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.836
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.836
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.836
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.826
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.817
29647.m002041 Ricinus communis 29647.m002041 N 0.812
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.812
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.812
MDP0000138865 Malus x domestica MDP0000138865 N 0.804
PK12631.1 Cannabis sativa PK12631.1 N 0.803
ppa006027m Prunus persica ppa006027m N 0.798
MDP0000123673 Malus x domestica MDP0000123673 N 0.793
mgf007780m Mimulus guttatus mgf007780m N 0.789
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.779
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.779
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.775
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.762
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.757
XM_002892115.1 Arabidopsis lyrata fgenesh2_kg.1__275__AT1G03457.2 N 0.742
AT1G03457 Arabidopsis thaliana AT1G03457-TAIR-G N 0.732