Glyma19g39300.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma19g39300.1 T52937_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma19g39300.1 RRM 15 84
Glyma19g39300.1 RRM 103 172
Glyma19g39300.1 RRM 346 416

Links

Other RRM family RBPs
Other Glycine max RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.981
29647.m002041 Ricinus communis 29647.m002041 N 0.915
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.915
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.915
PK12631.1 Cannabis sativa PK12631.1 N 0.910
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.905
MDP0000138865 Malus x domestica MDP0000138865 N 0.901
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.900
ppa006027m Prunus persica ppa006027m N 0.900
MDP0000123673 Malus x domestica MDP0000123673 N 0.900
Glyma02g17090.1 Glycine max Glyma02g17090.1 N 0.896
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.896
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.896
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.872
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.840
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.826
mgf007780m Mimulus guttatus mgf007780m N 0.825
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.822
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.822
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.817
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.817
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.803
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.798
SB09G018610 Sorghum bicolor Sb09g018610 N 0.793
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.789
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.779
XM_002892115.1 Arabidopsis lyrata fgenesh2_kg.1__275__AT1G03457.2 N 0.777
AT1G03457 Arabidopsis thaliana AT1G03457-TAIR-G N 0.763
mgf010250m Mimulus guttatus mgf010250m N 0.722