Glyma02g17090.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma02g17090.1 T52603_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma02g17090.1 RRM 17 86
Glyma02g17090.1 RRM 105 174
Glyma02g17090.1 RRM 343 413

Links

Other RRM family RBPs
Other Glycine max RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma10g02700.1 Glycine max Glyma10g02700.1 N 0.943
Glyma03g36650.1 Glycine max Glyma03g36650.1 N 0.905
Glyma19g39300.1 Glycine max Glyma19g39300.1 N 0.896
29647.m002041 Ricinus communis 29647.m002041 N 0.858
GSVIVG00011013001 Vitis vinifera GSVIVG00011013001 N 0.858
PK12631.1 Cannabis sativa PK12631.1 N 0.853
B9GTC1_POPTR Populus trichocarpa POPTR_0002s22730 N 0.844
B9I9Y4_POPTR Populus trichocarpa POPTR_0014s13070 N 0.844
ppa006027m Prunus persica ppa006027m N 0.844
cassava29564.valid.m1 Manihot esculenta cassava29564.valid.m1 N 0.844
Cucsa.084710 Cucumis sativus Cucsa.084710 N 0.839
cassava24659.valid.m1 Manihot esculenta cassava24659.valid.m1 N 0.839
MDP0000138865 Malus x domestica MDP0000138865 N 0.835
MDP0000123673 Malus x domestica MDP0000123673 N 0.834
LOC_Os01g71200 Oryza sativa LOC_Os01g71200 N 0.784
mgf007780m Mimulus guttatus mgf007780m N 0.783
LOC_Os05g30980 Oryza sativa LOC_Os05g30980 N 0.779
SB09G018610 Sorghum bicolor Sb09g018610 N 0.775
BRADI2G27260 Brachypodium distachyon BRADI2G27260 N 0.775
XM_002872750.1 Arabidopsis lyrata fgenesh2_kg.6__3385__AT4G03110.1 N 0.775
AtRBP-DR1 Arabidopsis thaliana AT4G03110-TAIR-G N 0.775
BRADI2G60300 Brachypodium distachyon BRADI2G60300 N 0.775
GRMZM2G177001 Zea mays GRMZM2G177001 N 0.770
Sb03g045340 Sorghum bicolor Sb03g045340 N 0.765
BGIOSIBCE018791 Oryza indica BGIOSIBCE018791 N 0.756
GRMZM2G005459 Zea mays GRMZM2G005459 N 0.751
XM_002892115.1 Arabidopsis lyrata fgenesh2_kg.1__275__AT1G03457.2 N 0.739
AT1G03457 Arabidopsis thaliana AT1G03457-TAIR-G N 0.716