BRADI3G02227 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G02227 T33216_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G02227.1 RRM 400 461
BRADI3G02227.1 RRM 493 556

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.897
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.897
B9GPU7_POPTR Populus trichocarpa POPTR_0002s15490 N 0.825
SB04G001910 Sorghum bicolor Sb04g001910 N 0.805
ppa008562m Prunus persica ppa008562m N 0.797
B9IC71_POPTR Populus trichocarpa POPTR_0014s07270 N 0.794
MDP0000583927 Malus x domestica MDP0000583927 N 0.789
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.786
cassava31733.valid.m1 Manihot esculenta cassava31733.valid.m1 N 0.786
cassava31732.valid.m1 Manihot esculenta cassava31732.valid.m1 N 0.786
B9ID09_POPTR Populus trichocarpa POPTR_0015s13880 N 0.778
PK11625.1 Cannabis sativa PK11625.1 N 0.773
GRMZM2G121269 Zea mays GRMZM2G121269 N 0.773
PK24775.1 Cannabis sativa PK24775.1 N 0.770
MDP0000288452 Malus x domestica MDP0000288452 N 0.770
ppa005993m Prunus persica ppa005993m N 0.770
B9I4G0_POPTR Populus trichocarpa POPTR_0012s13920 N 0.770
mgf016209m Mimulus guttatus mgf016209m N 0.766
mgf013695m Mimulus guttatus mgf013695m N 0.766
RS40 Arabidopsis thaliana AT4G25500-TAIR-G N 0.762
XM_002869624.1 Arabidopsis lyrata fgenesh2_kg.7__1711__AT4G25500.1 N 0.762
mgf011722m Mimulus guttatus mgf011722m N 0.762
Cucsa.042460 Cucumis sativus Cucsa.042460 N 0.758
Glyma03g01920.1 Glycine max Glyma03g01920.1 N 0.752
XM_002864102.1 Arabidopsis lyrata fgenesh2_kg.8__1091__AT5G52040.2 N 0.746
RS41 Arabidopsis thaliana AT5G52040-TAIR-G N 0.746
LjT39A22.50.nd Lotus japonicus LjT39A22.50.nd N 0.746
Glyma20g29460.1 Glycine max Glyma20g29460.1 N 0.738
Glyma10g38400.1 Glycine max Glyma10g38400.1 N 0.738
Medtr1g129430 Medicago truncatula Medtr1g129430 N 0.730
e_gw1.5.1267.1 Selaginella moellendorfii e_gw1.5.1267.1 N 0.722
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.701