ENSCJAG00000035318 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000035318 T35734_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.827
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.827
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000044375 RRM 78 139
ENSCJAP00000044375 RRM 149 214

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.827
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.827
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.827
SFPQ Procavia capensis ENSPCAG00000006164 I 0.827
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.827
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.827
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.827
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.827
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.827
SFPQ Bos taurus ENSBTAG00000016328 I 0.827
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.827
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.827
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.827
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.827
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.827
SFPQ Homo sapiens ENSG00000116560 D 0.827
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.827
SFPQ Echinops telfairi ENSETEG00000001095 I 0.827
Sfpq Mus musculus ENSMUSG00000028820 I 0.827
SFPQ Microcebus murinus ENSMICG00000011755 I 0.827
LOC100069588 Equus caballus ENSECAG00000000642 I 0.827
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.811
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.805
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.805
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.805
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.805
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.797
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.795
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.795
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.788
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.788
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.767
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.756
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.748
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.748
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.748