ENSCAFG00000017608 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000017608 T35165_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.895
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.895
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000030908 RRM 145 208
ENSCAFP00000030908 RRM 219 283

Links

Other RRM family RBPs
Other Canis familiaris RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sfpq Mus musculus ENSMUSG00000028820 I 0.887
SFPQ Microcebus murinus ENSMICG00000011755 I 0.887
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.887
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.887
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.887
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.887
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.887
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.887
SFPQ Procavia capensis ENSPCAG00000006164 I 0.887
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.887
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.887
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.887
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.887
SFPQ Bos taurus ENSBTAG00000016328 I 0.887
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.887
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.887
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.887
LOC100069588 Equus caballus ENSECAG00000000642 I 0.887
SFPQ Homo sapiens ENSG00000116560 D 0.887
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.887
SFPQ Echinops telfairi ENSETEG00000001095 I 0.887
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.879
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.872
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.865
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.865
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.864
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.864
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.857
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.857
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.856
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.856
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.820
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.809
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.802
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.794
ENSCJAG00000035318 Callithrix jacchus ENSCJAG00000035318 I 0.756
SFPQ Macaca mulatta ENSMMUG00000019154 I 0.740
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.737
sfpq Danio rerio ENSDARG00000011564 I 0.733
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.725
SFPQ Choloepus hoffmanni ENSCHOG00000009131 I 0.712
ENSMGAG00000004237 Meleagris gallopavo ENSMGAG00000004237 I 0.710