ENSDARG00000076682 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000076682 T36239_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.806
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000087742 RRM 37 107
ENSDARP00000087742 RRM 125 193
ENSDARP00000087742 RRM 389 427

Links

Other RRM family RBPs
Other Danio rerio RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.822
ACH69784 Xenopus laevis ACH69784 I 0.817
CELF4 Macaca mulatta ENSMMUG00000006866 I 0.816
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.812
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.806
BRUNOL4 Homo sapiens ENSG00000101489 D 0.806
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.806
Celf4 Mus musculus ENSMUSG00000024268 I 0.806
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.806
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.801
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.745
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.736
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.731
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.731
CELF4 Oryzias latipes ENSORLG00000008913 I 0.712
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.712
celf5 Danio rerio ENSDARG00000071375 I 0.703