ACH69784 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ACH69784 T59671_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.989
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.777
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.744
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ACH69784 RRM 54 123
ACH69784 RRM 142 210
ACH69784 RRM 409 458

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.995
BRUNOL4 Homo sapiens ENSG00000101489 D 0.989
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.989
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.989
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.989
Celf4 Mus musculus ENSMUSG00000024268 I 0.989
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.984
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.937
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.891
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.889
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.886
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.886
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.862
CELF4 Oryzias latipes ENSORLG00000008913 I 0.848
CELF4 Macaca mulatta ENSMMUG00000006866 I 0.847
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.842
CELF4 Tetraodon nigroviridis ENSTNIG00000010679 I 0.831
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.825
ENSDARG00000076682 Danio rerio ENSDARG00000076682 I 0.817
celf5 Danio rerio ENSDARG00000071375 I 0.801
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.797
CELF5 Oryzias latipes ENSORLG00000004600 I 0.796
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.782
BRUNOL5 Homo sapiens ENSG00000161082 D 0.782
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.773
AAH57704 Xenopus laevis AAH57704 I 0.773
AAH72134 Xenopus laevis AAH72134 I 0.773
Q91579 Xenopus laevis Q91579 I 0.773
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.773
AAA81375 Xenopus laevis AAA81375 I 0.773
ACH69785 Xenopus laevis ACH69785 I 0.773
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.773
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.768
AAH46942 Xenopus laevis AAH46942 I 0.768
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.763
celf3 Danio rerio ENSDARG00000034668 I 0.763
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.762
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.758
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.758
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.754
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.754
Celf6 Mus musculus ENSMUSG00000032297 I 0.754
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.752
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.749
CELF6 Sus scrofa ENSSSCG00000001928 I 0.749
HEXA Macaca mulatta ENSMMUG00000010687 I 0.749
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.749
BRUNOL6 Homo sapiens ENSG00000140488 D 0.749
CELF6 Felis catus ENSFCAG00000016249 I 0.749
CELF6 Bos taurus ENSBTAG00000014092 I 0.749
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.749
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.749
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.744
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.741
CELF4 Otolemur garnettii ENSOGAG00000010018 I 0.737
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.735
CELF3 Danio rerio ENSDARG00000006983 I 0.729
CELF6 Tursiops truncatus ENSTTRG00000002503 I 0.728
CELF3 Oryzias latipes ENSORLG00000010447 I 0.726
CELF3 Canis familiaris ENSCAFG00000012794 I 0.720
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.720
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.720
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.720
CELF3 Homo sapiens ENSG00000159409 I 0.720
CELF3 Equus caballus ENSECAG00000020365 I 0.720
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.720
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.720
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.720
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.720
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.720
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.720
Celf3 Mus musculus ENSMUSG00000028137 I 0.720
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.720
CELF3 Sus scrofa ENSSSCG00000006618 I 0.706
Bm1_27610 Brugia malayi Bm1_27610 I 0.701