CELF4 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000016826 T42684_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.995
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.763
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.739
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000015953 RRM 56 125
ENSTTRP00000015953 RRM 154 222
ENSTTRP00000015953 RRM 425 473

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL4 Homo sapiens ENSG00000101489 D 0.995
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.995
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.995
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.995
Celf4 Mus musculus ENSMUSG00000024268 I 0.989
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.989
ACH69784 Xenopus laevis ACH69784 I 0.984
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.931
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.894
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.882
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.882
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.877
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.857
CELF4 Macaca mulatta ENSMMUG00000006866 I 0.842
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.837
CELF4 Oryzias latipes ENSORLG00000008913 I 0.834
CELF4 Tetraodon nigroviridis ENSTNIG00000010679 I 0.830
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.810
ENSDARG00000076682 Danio rerio ENSDARG00000076682 I 0.801
CELF6 Macropus eugenii ENSMEUG00000010988 I 0.801
celf5 Danio rerio ENSDARG00000071375 I 0.787
CELF5 Oryzias latipes ENSORLG00000004600 I 0.782
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.777
BRUNOL5 Homo sapiens ENSG00000161082 D 0.768
ACH69785 Xenopus laevis ACH69785 I 0.768
AAH72134 Xenopus laevis AAH72134 I 0.758
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.758
Q91579 Xenopus laevis Q91579 I 0.758
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.758
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.758
AAA81375 Xenopus laevis AAA81375 I 0.758
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.758
AAH57704 Xenopus laevis AAH57704 I 0.758
AAH46942 Xenopus laevis AAH46942 I 0.754
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.754
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.754
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.749
Celf6 Mus musculus ENSMUSG00000032297 I 0.749
celf3 Danio rerio ENSDARG00000034668 I 0.749
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.748
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.744
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.744
CELF6 Sus scrofa ENSSSCG00000001928 I 0.744
HEXA Macaca mulatta ENSMMUG00000010687 I 0.744
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.744
CELF6 Felis catus ENSFCAG00000016249 I 0.744
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.744
CELF6 Bos taurus ENSBTAG00000014092 I 0.744
BRUNOL6 Homo sapiens ENSG00000140488 D 0.744
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.744
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.739
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.739
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.738
CELF4 Otolemur garnettii ENSOGAG00000010018 I 0.737
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.736
CELF6 Tursiops truncatus ENSTTRG00000002503 I 0.732
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.730
CELF3 Danio rerio ENSDARG00000006983 I 0.724
CELF3 Oryzias latipes ENSORLG00000010447 I 0.712
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.706
CELF3 Equus caballus ENSECAG00000020365 I 0.706
CELF3 Canis familiaris ENSCAFG00000012794 I 0.706
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.706
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.706
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.706
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.706
Celf3 Mus musculus ENSMUSG00000028137 I 0.706
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.706
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.706
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.706
CELF3 Homo sapiens ENSG00000159409 I 0.706
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.706
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.706