ENSMGAG00000004237 (Meleagris gallopavo)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMGAG00000004237 T38349_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.759
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.759
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000004030 RRM 1 36
ENSMGAP00000004030 RRM 46 112
ENSMGAP00000004032 RRM 1 37
ENSMGAP00000004032 RRM 47 113

Links

Other RRM family RBPs
Other Meleagris gallopavo RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Choloepus hoffmanni ENSCHOG00000009131 I 0.971
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.780
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.780
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.759
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.759
SFPQ Bos taurus ENSBTAG00000016328 I 0.759
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.759
LOC100069588 Equus caballus ENSECAG00000000642 I 0.759
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.759
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.759
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.759
SFPQ Homo sapiens ENSG00000116560 D 0.759
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.759
SFPQ Echinops telfairi ENSETEG00000001095 I 0.759
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.759
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.759
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.759
SFPQ Procavia capensis ENSPCAG00000006164 I 0.759
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.759
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.759
Sfpq Mus musculus ENSMUSG00000028820 I 0.759
SFPQ Microcebus murinus ENSMICG00000011755 I 0.759
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.759
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.759
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.759
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.759
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.752
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.750
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.744
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.729
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.720
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.720
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.712
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.710
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.705
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.705