CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RAVER2
(
Tarsius syrichta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTSYG00000006019
T42445_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000005535
RRM
10
51
DLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQHSFRGKDLV
ENSTSYP00000005535
RRM
61
130
LCVTNLPVCFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLGKQLGASAL
ENSTSYP00000005535
RRM
150
220
LCIDKLPSDYRDSEELLQFFSSVHKPVFCQLAQDEGSHVGGFAVVEYSTAEHAEEVQQAADGLTIRGGKVQ
Links
Other
RRM
family RBPs
Other
Tarsius syrichta
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RAVER2
Gorilla gorilla
ENSGGOG00000016447
N
0.929
RAVER2
Canis familiaris
ENSCAFG00000018617
N
0.929
RAVER2
Pteropus vampyrus
ENSPVAG00000007172
N
0.907
RAVER2
Equus caballus
ENSECAG00000022014
N
0.904
RAVER2
Tupaia belangeri
ENSTBEG00000009004
N
0.903
RAVER2
Loxodonta africana
ENSLAFG00000012508
N
0.894
RAVER2
Bos taurus
ENSBTAG00000030686
N
0.863
Ame_R013192
Ailuropoda melanoleuca
Ame_R013192
N
0.858
RAVER2
Choloepus hoffmanni
ENSCHOG00000007668
N
0.858
Raver2
Dipodomys ordii
ENSDORG00000002498
N
0.855
RAVER2
Otolemur garnettii
ENSOGAG00000011157
N
0.849
RAVER2
Pan troglodytes
ENSPTRG00000000824
N
0.839
ENSPPYG00000001271
Pongo pygmaeus
ENSPPYG00000001271
N
0.834
RAVER2
Macaca mulatta
ENSMMUG00000018565
N
0.834
LOC100406727
Callithrix jacchus
ENSCJAG00000016724
N
0.833
RAVER2
Homo sapiens
ENSG00000162437
N
0.824
Raver2
Rattus norvegicus
ENSRNOG00000023812
N
0.795
Raver2
Mus musculus
ENSMUSG00000035275
N
0.785
RAVER2
Ornithorhynchus anatinus
ENSOANG00000008327
N
0.762
RAVER2
Oryctolagus cuniculus
ENSOCUG00000006221
N
0.757
RAVER2
Monodelphis domestica
ENSMODG00000001242
N
0.747
RAVER2
Cavia porcellus
ENSCPOG00000005986
N
0.737
RAVER2
Gallus gallus
ENSGALG00000011026
N
0.716
RAVER2
Meleagris gallopavo
ENSMGAG00000011806
N
0.716