Zfml (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000014501 T41094_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZNF638
M155_0.6 		Homo sapiens BGUUSKU RNAcompete
Ray et al.(2013)
RNCMPT00164 		0.723
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000019617 RRM 632 688
ENSRNOP00000019617 RRM 857 907
ENSRNOP00000045055 RRM 678 734
ENSRNOP00000045055 RRM 880 930
ENSRNOP00000054399 RRM 678 734
ENSRNOP00000054399 RRM 903 953
ENSRNOP00000054400 RRM 678 734
ENSRNOP00000054400 RRM 903 953
ENSRNOP00000054401 RRM 678 734
ENSRNOP00000054401 RRM 903 953
ENSRNOP00000060889 RRM 678 734
ENSRNOP00000060889 RRM 903 953

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Zfml Mus musculus ENSMUSG00000030016 N 0.963
ZNF638 Oryctolagus cuniculus ENSOCUG00000010045 I 0.791
Zfml Dipodomys ordii ENSDORG00000007360 I 0.787
ZNF638 Tarsius syrichta ENSTSYG00000012849 I 0.782
ZNF638 Equus caballus ENSECAG00000007715 I 0.766
ZNF638 Vicugna pacos ENSVPAG00000004117 I 0.755
ZNF638 Tursiops truncatus ENSTTRG00000014220 I 0.754
ZNF638 Macaca mulatta ENSMMUG00000007175 I 0.752
ZNF638 Canis familiaris ENSCAFG00000009067 I 0.741
Ame_R002690 Ailuropoda melanoleuca Ame_R002690 I 0.734
ZNF638 Pan troglodytes ENSPTRG00000012048 I 0.732
ZNF638 Bos taurus ENSBTAG00000009242 I 0.730
ZNF638 Homo sapiens ENSG00000075292 D 0.723
ZNF638 Gorilla gorilla ENSGGOG00000012511 I 0.723
ZNF638 Dasypus novemcinctus ENSDNOG00000002173 I 0.721
ZNF638 Cavia porcellus ENSCPOG00000010101 I 0.718
ZNF638 Loxodonta africana ENSLAFG00000008513 I 0.712
ZNF638 Pteropus vampyrus ENSPVAG00000008368 I 0.700