CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZNF638
(
Macaca mulatta
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMMUG00000007175
T38852_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ZNF638
M155_0.6
Homo sapiens
BGUUSKU
RNAcompete
Ray et al.(2013)
RNCMPT00164
0.920
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000009406
RRM
678
738
LLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLM
ENSMMUP00000009406
RRM
907
958
MLISNLPNKGYSIEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMIK
ENSMMUP00000009407
RRM
678
738
LLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLM
ENSMMUP00000009407
RRM
907
958
MLISNLPNKGYSIEEVYDLAKPFGGLKDILILSSHKKAYIEINRKAAESMIK
ENSMMUP00000036502
RRM
678
738
LLISELPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLM
Links
Other
RRM
family RBPs
Other
Macaca mulatta
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZNF638
Pan troglodytes
ENSPTRG00000012048
I
0.984
ZNF638
Homo sapiens
ENSG00000075292
D
0.967
ZNF638
Gorilla gorilla
ENSGGOG00000012511
I
0.929
ZNF638
Choloepus hoffmanni
ENSCHOG00000013922
N
0.885
ZNF638
Tursiops truncatus
ENSTTRG00000014220
I
0.870
ZNF638
Tarsius syrichta
ENSTSYG00000012849
I
0.867
ZNF638
Equus caballus
ENSECAG00000007715
I
0.867
ZNF638
Callithrix jacchus
ENSCJAG00000019436
I
0.857
ZNF638
Oryctolagus cuniculus
ENSOCUG00000010045
I
0.850
ZNF638
Bos taurus
ENSBTAG00000009242
I
0.841
ZNF638
Vicugna pacos
ENSVPAG00000004117
I
0.841
ZNF638
Canis familiaris
ENSCAFG00000009067
I
0.832
Zfml
Dipodomys ordii
ENSDORG00000007360
I
0.814
ZNF638
Dasypus novemcinctus
ENSDNOG00000002173
I
0.805
Ame_R002690
Ailuropoda melanoleuca
Ame_R002690
I
0.805
ZNF638
Pteropus vampyrus
ENSPVAG00000008368
I
0.779
ZNF638
Loxodonta africana
ENSLAFG00000008513
I
0.770
Zfml
Rattus norvegicus
ENSRNOG00000014501
I
0.752
ZNF638
Sorex araneus
ENSSARG00000000956
I
0.726
Zfml
Mus musculus
ENSMUSG00000030016
N
0.717
ZNF638
Cavia porcellus
ENSCPOG00000010101
I
0.704