hnrnpm (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000001777 T42820_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000003692 RRM 28 95
ENSXETP00000003692 RRM 160 229
ENSXETP00000003692 RRM 577 645
ENSXETP00000003693 RRM 35 104
ENSXETP00000003693 RRM 173 242
ENSXETP00000003693 RRM 580 648
ENSXETP00000003694 RRM 25 90
ENSXETP00000003694 RRM 153 222
ENSXETP00000003694 RRM 448 516
ENSXETP00000003696 RRM 35 100
ENSXETP00000003696 RRM 157 226
ENSXETP00000003696 RRM 454 522
ENSXETP00000057903 RRM 4 69
ENSXETP00000057903 RRM 130 199
ENSXETP00000057903 RRM 426 494

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI34826 Xenopus laevis AAI34826 N 0.914
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.810
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.805
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.805
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.805
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.805
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.805
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.805
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.805
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.805
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.805
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.805
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.805
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.805
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.805
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.805
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.805
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.805
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.805
HNRNPM Homo sapiens ENSG00000099783 N 0.805
HNRNPM Equus caballus ENSECAG00000023868 N 0.805
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.805
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.805
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.800
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.796
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.790
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.783
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.781
HNRNPM Sorex araneus ENSSARG00000000267 N 0.773
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.763
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.744
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.744
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.733
HNRNPM Felis catus ENSFCAG00000015218 N 0.711
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.711
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.711
HNRNPM Otolemur garnettii ENSOGAG00000003234 N 0.705