CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000000700
T38300_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000000090
RRM
33
103
AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLK
ENSMGAP00000000090
RRM
127
197
VFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQETKAMFNGQLLFDRPMH
ENSMGAP00000000090
RRM
567
636
IFVRNLPFDFTWKMLKDKFNECEGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREID
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
71 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.976
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.943
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.943
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.943
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.943
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.943
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.943
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.943
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.943
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.943
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.943
HNRNPM
Homo sapiens
ENSG00000099783
N
0.943
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.943
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.943
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.943
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.943
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.943
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.943
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.943
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.943
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.943
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.939
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.939
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.929
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.929
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.920
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.920
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.901
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.882
HNRNPM
Dasypus novemcinctus
ENSDNOG00000012157
N
0.882
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.873
HNRNPM
Felis catus
ENSFCAG00000015218
N
0.849
AAI34826
Xenopus laevis
AAI34826
N
0.840
HNRNPM
Otolemur garnettii
ENSOGAG00000003234
N
0.830
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.825
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.807
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.797
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.783
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.778
HNRNPM
Tetraodon nigroviridis
ENSTNIG00000015530
N
0.769
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.759
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.759
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.755
MYEF2
Homo sapiens
ENSG00000104177
N
0.755
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.755
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.755
Myef2
Mus musculus
ENSMUSG00000027201
N
0.755
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.755
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.755
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.755
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.755
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.755
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.755
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.755
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.755
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.755
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.755
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.755
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.755
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.750
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.750
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.745
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.741
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.731
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.717
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.712
AAI08588
Xenopus laevis
AAI08588
N
0.712
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.710
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.709
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.703
myef2
Danio rerio
ENSDARG00000059398
N
0.703