CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000008718
T41746_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000007557
RRM
35
105
AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLK
ENSTBEP00000007557
RRM
168
237
VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMH
ENSTBEP00000007557
RRM
610
677
IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVLQFEPEVAERACRMMNDMKLSGREID
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
73 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.981
HNRNPM
Homo sapiens
ENSG00000099783
N
0.981
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.981
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.981
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.981
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.981
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.981
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.981
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.981
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.981
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.981
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.981
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.981
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.981
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.981
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.981
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.981
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.976
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.976
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.976
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.976
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.971
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.962
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.957
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.948
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.943
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.929
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.924
HNRNPM
Dasypus novemcinctus
ENSDNOG00000012157
N
0.910
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.910
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.900
HNRNPM
Felis catus
ENSFCAG00000015218
N
0.882
HNRNPM
Otolemur garnettii
ENSOGAG00000003234
N
0.867
AAI34826
Xenopus laevis
AAI34826
N
0.848
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.838
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.806
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.791
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.790
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.773
HNRNPM
Tetraodon nigroviridis
ENSTNIG00000015530
N
0.763
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.763
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.763
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.758
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.758
Myef2
Mus musculus
ENSMUSG00000027201
N
0.758
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.758
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.758
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.758
MYEF2
Homo sapiens
ENSG00000104177
N
0.758
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.758
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.758
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.758
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.758
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.758
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.758
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.758
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.758
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.754
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.754
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.754
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.754
MYEF2
Sus scrofa
ENSSSCG00000004661
N
0.749
MYEF2
Anolis carolinensis
ENSACAG00000004806
N
0.744
myef2
Xenopus tropicalis
ENSXETG00000018412
N
0.735
AAI08588
Xenopus laevis
AAI08588
N
0.725
MYEF2
Gasterosteus aculeatus
ENSGACG00000016759
N
0.725
MYEF2
Tetraodon nigroviridis
ENSTNIG00000009526
N
0.722
ENSMODG00000003473
Monodelphis domestica
ENSMODG00000003473
N
0.718
MYEF2
Cavia porcellus
ENSCPOG00000010584
N
0.712
MYEF2
Oryzias latipes
ENSORLG00000002730
N
0.711
myef2
Danio rerio
ENSDARG00000059398
N
0.706
MYEF2
Takifugu rubripes
ENSTRUG00000016967
N
0.706
MYEF2
Monodelphis domestica
ENSMODG00000002744
N
0.701