CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000012157
T36343_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000009444
RRM
73
143
AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLK
ENSDNOP00000009444
RRM
206
265
VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIXXXX
ENSDNOP00000009444
RRM
652
720
IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREID
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
62 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.990
HNRNPM
Felis catus
ENSFCAG00000015218
N
0.965
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.929
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.929
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.929
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.929
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.929
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.929
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.929
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.929
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.929
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.929
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.929
HNRNPM
Homo sapiens
ENSG00000099783
N
0.929
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.929
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.929
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.929
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.929
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.929
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.924
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.924
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.924
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.924
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.919
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.910
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.910
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.905
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.900
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.891
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.882
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.877
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.858
HNRNPM
Otolemur garnettii
ENSOGAG00000003234
N
0.815
AAI34826
Xenopus laevis
AAI34826
N
0.801
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.791
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.755
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.749
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.745
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.744
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.726
HNRNPM
Tetraodon nigroviridis
ENSTNIG00000015530
N
0.717
MYEF2
Loxodonta africana
ENSLAFG00000012990
N
0.712
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.712
MYEF2
Procavia capensis
ENSPCAG00000016660
N
0.708
Myef2
Mus musculus
ENSMUSG00000027201
N
0.708
MYEF2
Homo sapiens
ENSG00000104177
N
0.708
A6QQP0_BOVIN
Bos taurus
ENSBTAG00000008771
N
0.708
Q5ZHY2_CHICK
Gallus gallus
ENSGALG00000004905
N
0.708
MYEF2
Canis familiaris
ENSCAFG00000014008
N
0.708
Ame_R005511
Ailuropoda melanoleuca
Ame_R005511
N
0.708
ENSPPYG00000006452
Pongo pygmaeus
ENSPPYG00000006452
N
0.708
MYEF2
Vicugna pacos
ENSVPAG00000004721
N
0.708
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.708
MYEF2
Oryctolagus cuniculus
ENSOCUG00000013043
N
0.708
MYEF2
Pan troglodytes
ENSPTRG00000007042
N
0.708
MYEF2
Macaca mulatta
ENSMMUG00000018834
N
0.708
MYEF2
Tursiops truncatus
ENSTTRG00000008076
N
0.708
MYEF2
Meleagris gallopavo
ENSMGAG00000006915
N
0.708
MYEF2
Callithrix jacchus
ENSCJAG00000001875
N
0.703
MYEF2
Taeniopygia guttata
ENSTGUG00000007130
N
0.703
ENSDORG00000015835
Dipodomys ordii
ENSDORG00000015835
N
0.703
MYEF2
Gorilla gorilla
ENSGGOG00000014968
N
0.703