CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000015218
T37148_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000014117
RRM
73
143
AFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLK
ENSFCAP00000014117
RRM
206
265
VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIXXXX
ENSFCAP00000014117
RRM
654
718
IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSGCGVVKFESPEVADRACRMMNMKLSGRI
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPM
Dasypus novemcinctus
ENSDNOG00000012157
N
0.965
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.955
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.896
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.896
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.896
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.896
HNRNPM
Homo sapiens
ENSG00000099783
N
0.896
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.896
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.896
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.896
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.896
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.896
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.896
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.896
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.896
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.896
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.896
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.896
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.896
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.891
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.891
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.891
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.891
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.886
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.882
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.877
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.872
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.867
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.858
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.852
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.849
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.844
HNRNPM
Otolemur garnettii
ENSOGAG00000003234
N
0.782
AAI34826
Xenopus laevis
AAI34826
N
0.768
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.758
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.722
MYEF2
Tarsius syrichta
ENSTSYG00000010575
N
0.714
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.712
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.711