CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000003234
T39818_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000002890
RRM
93
143
XXXGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLK
ENSOGAP00000002890
RRM
206
275
VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMH
ENSOGAP00000002890
RRM
653
720
IFVRNPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREID
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
43 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPM
Macaca mulatta
ENSMMUG00000018806
N
0.889
HNRNPM
Canis familiaris
ENSCAFG00000018524
N
0.889
HNRNPM
Equus caballus
ENSECAG00000023868
N
0.886
Q3SYX2_BOVIN
Bos taurus
ENSBTAG00000021039
N
0.886
Ame_R017061
Ailuropoda melanoleuca
Ame_R017061
N
0.886
HNRNPM
Echinops telfairi
ENSETEG00000019712
N
0.886
HNRNPM
Gorilla gorilla
ENSGGOG00000003498
N
0.886
ENSOCUG00000024611
Oryctolagus cuniculus
ENSOCUG00000024611
N
0.886
ENSOCUG00000000552
Oryctolagus cuniculus
ENSOCUG00000000552
N
0.886
HNRNPM
Loxodonta africana
ENSLAFG00000013603
N
0.886
HNRNPM
Tursiops truncatus
ENSTTRG00000009769
N
0.886
HNRNPM
Homo sapiens
ENSG00000099783
N
0.886
HNRNPM
Choloepus hoffmanni
ENSCHOG00000013627
N
0.886
Hnrpm
Rattus norvegicus
ENSRNOG00000007921
N
0.886
HNRNPM
Sus scrofa
ENSSSCG00000013602
N
0.886
HNRNPM
Pan troglodytes
ENSPTRG00000010424
N
0.886
ENSPPYG00000009506
Pongo pygmaeus
ENSPPYG00000009506
N
0.886
HNRNPM
Callithrix jacchus
ENSCJAG00000010802
N
0.884
HNRNPM
Myotis lucifugus
ENSMLUG00000006696
N
0.881
HNRNPM
Cavia porcellus
ENSCPOG00000015182
N
0.881
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.881
XM_001365870.1
Monodelphis domestica
ENSMODG00000003801
N
0.879
HNRNPM
Tupaia belangeri
ENSTBEG00000008718
N
0.867
HNRNPM
Procavia capensis
ENSPCAG00000009678
N
0.867
HNRNPM
Microcebus murinus
ENSMICG00000002532
N
0.862
HNRNPM
Sorex araneus
ENSSARG00000000267
N
0.853
Q5ZL80_CHICK
Gallus gallus
ENSGALG00000000377
N
0.844
HNRNPM
Meleagris gallopavo
ENSMGAG00000000700
N
0.830
HNRNPM
Ochotona princeps
ENSOPRG00000001943
N
0.829
HNRNPM
Dasypus novemcinctus
ENSDNOG00000012157
N
0.815
HNRNPM
Spermophilus tridecemlineatus
ENSSTOG00000008112
N
0.814
HNRNPM
Macropus eugenii
ENSMEUG00000004789
N
0.806
HNRNPM
Felis catus
ENSFCAG00000015218
N
0.782
MYEF2
Sorex araneus
ENSSARG00000003264
N
0.759
AAI34826
Xenopus laevis
AAI34826
N
0.757
ENSRNOG00000024645
Rattus norvegicus
ENSRNOG00000024645
N
0.752
HNRNPM
Gasterosteus aculeatus
ENSGACG00000010265
N
0.730
HNRNPM
Oryzias latipes
ENSORLG00000005400
N
0.725
LOC100070256
Equus caballus
ENSECAG00000005741
N
0.718
ENSBTAG00000039263
Bos taurus
ENSBTAG00000039263
N
0.716
hnrnpm
Xenopus tropicalis
ENSXETG00000001777
N
0.705
HNRNPM
Takifugu rubripes
ENSTRUG00000013783
N
0.701
Myef2
Rattus norvegicus
ENSRNOG00000005258
N
0.701