SB03G027820 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb03g027820 T45959_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb03g027820.1 RRM 77 146
Sb03g027820.1 RRM 178 247

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G049866 Zea mays GRMZM2G049866 N 0.986
LOC_Os01g42820 Oryza sativa LOC_Os01g42820 N 0.964
GRMZM2G117715 Zea mays GRMZM2G117715 N 0.957
BRADI2G43460 Brachypodium distachyon BRADI2G43460 N 0.929
PK28408.1 Cannabis sativa PK28408.1 N 0.800
MDP0000596919 Malus x domestica MDP0000596919 N 0.786
MDP0000250519 Malus x domestica MDP0000250519 N 0.779
ppa005857m Prunus persica ppa005857m N 0.771
mgf018937m Mimulus guttatus mgf018937m N 0.746
MDP0000410930 Malus x domestica MDP0000410930 N 0.743
MDP0000575061 Malus x domestica MDP0000575061 N 0.743
PK03611.1 Cannabis sativa PK03611.1 N 0.736
Glyma06g33940.1 Glycine max Glyma06g33940.1 N 0.736
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.736
mgf011517m Mimulus guttatus mgf011517m N 0.732
mgf005844m Mimulus guttatus mgf005844m N 0.732
Cucsa.273510 Cucumis sativus Cucsa.273510 N 0.729
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.729
Glyma12g19050.1 Glycine max Glyma12g19050.1 N 0.729
chr3.CM0282.340.nc Lotus japonicus chr3.CM0282.340.nc N 0.729
LjT18N19.10.nd Lotus japonicus LjT18N19.10.nd N 0.714
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.714
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.700
MDP0000709988 Malus x domestica MDP0000709988 N 0.700
Glyma07g32660.1 Glycine max Glyma07g32660.1 N 0.700