MDP0000575061 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000575061 T57691_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000575061 RRM 74 143
MDP0000575061 RRM 169 238

Links

Other RRM family RBPs
Other Malus x domestica RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000410930 Malus x domestica MDP0000410930 N 1.000
MDP0000250519 Malus x domestica MDP0000250519 N 0.950
MDP0000596919 Malus x domestica MDP0000596919 N 0.921
ppa005857m Prunus persica ppa005857m N 0.893
PK28408.1 Cannabis sativa PK28408.1 N 0.886
Cucsa.273510 Cucumis sativus Cucsa.273510 N 0.829
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.807
chr3.CM0282.340.nc Lotus japonicus chr3.CM0282.340.nc N 0.793
Glyma06g33940.1 Glycine max Glyma06g33940.1 N 0.793
Glyma12g19050.1 Glycine max Glyma12g19050.1 N 0.786
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.779
XM_002882862.1 Arabidopsis lyrata fgenesh2_kg.3__1628__AT3G15010.2 N 0.764
MDP0000245564 Malus x domestica MDP0000245564 N 0.757
MDP0000293302 Malus x domestica MDP0000293302 N 0.757
GRMZM2G117715 Zea mays GRMZM2G117715 N 0.743
SB03G027820 Sorghum bicolor Sb03g027820 N 0.743
MDP0000601282 Malus x domestica MDP0000601282 N 0.743
mgf018937m Mimulus guttatus mgf018937m N 0.739
XM_002894385.1 Arabidopsis lyrata scaffold_105150.1 N 0.736
GRMZM2G049866 Zea mays GRMZM2G049866 N 0.736
PK03611.1 Cannabis sativa PK03611.1 N 0.729
LOC_Os01g42820 Oryza sativa LOC_Os01g42820 N 0.721
BRADI2G43460 Brachypodium distachyon BRADI2G43460 N 0.714
MDP0000709988 Malus x domestica MDP0000709988 N 0.700