gw1.11.214.1 (Batrachochytrium dendrobatidis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.11.214.1 T53050_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.11.214.1 RRM 7 77

Links

Other RRM family RBPs
Other Batrachochytrium dendrobatidis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.761
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.746
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.746
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.732
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.732
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.732
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.718
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.718
e_gw1.16.107.1 Emiliania huxleyi e_gw1.16.107.1 N 0.704
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.704
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.704
e_gw1.8.125.1 Emiliania huxleyi e_gw1.8.125.1 N 0.704
gw1.5.1084.1 Ostreococcus RCC809 gw1.5.1084.1 N 0.704
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.704
gwEuk.5.447.1 Ostreococcus lucimarinus gwEuk.5.447.1 N 0.704
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.704
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.704
gw1.45.178.1 Lottia gigantea gw1.45.178.1 N 0.704
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.704
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.704
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.704
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.704
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.704
An04g00680 Aspergillus niger CADANGAG00003776 N 0.704
MCYG_01275 Microsporum canis MCYG_01275 N 0.704