gwh2.1.1054.1 (Phanerochaete chrysosporium)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gwh2.1.1054.1 T53477_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gwh2.1.1054.1 RRM 36 112

Links

Other RRM family RBPs
Other Phanerochaete chrysosporium RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.935
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.909
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.909
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.896
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.896
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.870
CNBG_4502 Cryptococcus neoformans CNBG_4502 N 0.779
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.766
UM04861 Ustilago maydis UM04861 N 0.753
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.753
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.740
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.740
PGTG_01720 Puccinia graminis PGTG_01720 N 0.740
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.727
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.727
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.727
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.727
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.727
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.727
NCU00210 Neurospora crassa NCU00210 N 0.714
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.714
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.714
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.714
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.714
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.714
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.714
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.714
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.714
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.714
An12g03930 Aspergillus niger CADANGAG00009835 N 0.714
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.714
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.714
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.701
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.701
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.701
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.701
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.701
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.701
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.701
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.701
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.701
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.701
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.701
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.701
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.701
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.701
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.701
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.701
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.701
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.701
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.701
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.701
MCYG_04468 Microsporum canis MCYG_04468 N 0.701
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.701
TERG_03424 Trichophyton rubrum TERG_03424 N 0.701