An12g03930 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00009835 T33570_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00009649 RRM 49 119

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 1.000
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.986
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.986
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.986
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.972
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.958
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.958
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.958
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.958
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.958
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.958
MCYG_04468 Microsporum canis MCYG_04468 N 0.958
TERG_03424 Trichophyton rubrum TERG_03424 N 0.958
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.958
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.958
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.958
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.944
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.944
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.944
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.930
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.930
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.930
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.930
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.930
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.930
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.930
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.930
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.930
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.915
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.915
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.915
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.915
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.915
NCU00210 Neurospora crassa NCU00210 N 0.915
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.915
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.901
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.901
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.901
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.901
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.873
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.861
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.833
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.817
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.803
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.803
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.789
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.789
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.775
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.775
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.761
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.761
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.761
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.761
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.746
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.746
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.746
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.733
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.733
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
PHUM535920 Pediculus humanus PHUM535920 N 0.732
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.732
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.732
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.727
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.718
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.714
AAH72902 Xenopus laevis AAH72902 N 0.704
CAA59259 Xenopus laevis CAA59259 N 0.704
2118330B Xenopus laevis 2118330B N 0.704
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.704
NCBP2 Gallus gallus ENSGALG00000006843 N 0.704
P52299 Xenopus laevis P52299 N 0.704
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.704
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.704
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.704
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.701
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.701
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.701