PGTG_01720 (Puccinia graminis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PGTG_01720 T29978_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_01720 RRM 36 106

Links

Other RRM family RBPs
Other Puccinia graminis RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.901
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.803
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.775
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.775
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.761
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.761
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.761
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.761
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.761
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.761
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.761
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.761
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.761
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.761
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.761
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.761
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.746
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.746
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.746
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.746
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.746
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.746
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.746
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.746
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.746
An12g03930 Aspergillus niger CADANGAG00009835 N 0.746
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.746
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.746
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.746
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.746
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.740
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.732
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.732
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.732
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.732
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.732
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.732
TERG_03424 Trichophyton rubrum TERG_03424 N 0.732
MCYG_04468 Microsporum canis MCYG_04468 N 0.732
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.732
NCU00210 Neurospora crassa NCU00210 N 0.732
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.732
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.732
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.732
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.732
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.732
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.732
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.732
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.732
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.727
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.727
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.718
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.718
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.718
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.718
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.718
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.718
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.704
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.704
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.701