mgf008981m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf008981m T53660_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.708
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
mgf008981m RRM 110 181

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf018525m Mimulus guttatus mgf018525m I 0.958
PK16312.1 Cannabis sativa PK16312.1 I 0.806
BRADI3G12840 Brachypodium distachyon BRADI3G12840 I 0.806
GSVIVG00023509001 Vitis vinifera GSVIVG00023509001 I 0.806
cassava22669.valid.m1 Manihot esculenta cassava22669.valid.m1 I 0.806
XM_002884402.1 Arabidopsis lyrata fgenesh2_kg.3__407__AT3G04500.1 I 0.806
Cucsa.178480 Cucumis sativus Cucsa.178480 I 0.792
Glyma20g36570.1 Glycine max Glyma20g36570.1 I 0.792
29680.m001693 Ricinus communis 29680.m001693 I 0.792
GRMZM2G068255 Zea mays GRMZM2G068255 I 0.792
Sb02g038420 Sorghum bicolor Sb02g038420 I 0.792
AT3G04500 Arabidopsis thaliana AT3G04500-TAIR-G I 0.792
BGIOSIBCE028936 Oryza indica BGIOSIBCE028936 I 0.778
BRADI3G49130 Brachypodium distachyon BRADI3G49130 I 0.778
mgf021739m Mimulus guttatus mgf021739m I 0.778
Glyma10g30900.1 Glycine max Glyma10g30900.1 I 0.778
Medtr1g093610 Medicago truncatula Medtr1g093610 I 0.778
PDK_20s1301681g005 Phoenix dactylifera PDK_20s1301681g005 I 0.778
LOC_Os08g45240 Oryza sativa LOC_Os08g45240 I 0.778
B9IPA5_POPTR Populus trichocarpa POPTR_0019s03570 I 0.778
GSVIVG00016104001 Vitis vinifera GSVIVG00016104001 I 0.778
Glyma11g01300.1 Glycine max Glyma11g01300.1 I 0.778
B9I5N8_POPTR Populus trichocarpa POPTR_0013s04390 I 0.778
BGIOSIBCE007866 Oryza indica BGIOSIBCE007866 I 0.764
PDK_20s1323974g003 Phoenix dactylifera PDK_20s1323974g003 I 0.764
MDP0000320908 Malus x domestica MDP0000320908 I 0.764
ppa010477m Prunus persica ppa010477m I 0.764
MDP0000283678 Malus x domestica MDP0000283678 I 0.764
LjSGA_021949.1 Lotus japonicus LjSGA_021949.1 I 0.750
LOC_Os02g40900 Oryza sativa LOC_Os02g40900 I 0.750
SB04G026430 Sorghum bicolor Sb04g026430 I 0.736
GRMZM2G125529 Zea mays GRMZM2G125529 I 0.736
gw1.0.1780.1 Selaginella moellendorfii gw1.0.1780.1 I 0.712
e_gw1.156.67.1 Physcomitrella patens e_gw1.156.67.1 I 0.708
RBM42 Gasterosteus aculeatus ENSGACG00000004170 I 0.708
A2VDB3 Xenopus laevis A2VDB3 I 0.708
PDK_20s1329112g001 Phoenix dactylifera PDK_20s1329112g001 N 0.708
AAI29698 Xenopus laevis AAI29698 I 0.708
RBM42 Oryzias latipes ENSORLG00000003387 I 0.708
RBM42 Takifugu rubripes ENSTRUG00000004663 I 0.708
RBM42 Tetraodon nigroviridis ENSTNIG00000011669 I 0.708
ENSXETG00000017599 Xenopus tropicalis ENSXETG00000017599 D 0.708