Fxr1 (Dipodomys ordii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDORG00000005853 T18675_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.836
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000005482 KH 220 279
ENSDORP00000005482 KH 284 331

Links

Other KH family RBPs
Other Dipodomys ordii RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.773
AAH43638 Xenopus laevis AAH43638 I 0.773
AAH73457 Xenopus laevis AAH73457 I 0.781
AAI31885 Xenopus laevis AAI31885 I 0.781
AAY79165 Xenopus laevis AAY79165 I 0.781
AAY79166 Xenopus laevis AAY79166 I 0.781
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.836
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.797
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.748
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.836
FXR1 Canis familiaris ENSCAFG00000011582 I 0.836
FMR1 Canis familiaris ENSCAFG00000019085 I 0.765
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.759
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.836
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.727
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.836
fxr1 Danio rerio ENSDARG00000022968 I 0.705
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 1.000
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.763
FXR1 Equus caballus ENSECAG00000007560 I 0.836
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.820
FXR1 Echinops telfairi ENSETEG00000006891 I 0.836
FMR1 Homo sapiens ENSG00000102081 D 0.752
FXR1 Homo sapiens ENSG00000114416 D 0.836
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.805
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.836
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.765
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.836
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.739
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.702
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.805
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.836
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.836
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.752
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.828
Fmr1 Mus musculus ENSMUSG00000000838 I 0.746
Fxr1 Mus musculus ENSMUSG00000027680 I 0.828
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.744
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.828
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.750
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.836
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.730
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.789
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.765
FXR1 Oryzias latipes ENSORLG00000011787 I 0.705
FMR1 Procavia capensis ENSPCAG00000011936 N 0.733
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.836
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.836
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.752
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.828
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.721
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.848
FMR1 Sorex araneus ENSSARG00000003475 N 0.777
FXR1 Sus scrofa ENSSSCG00000011769 I 0.828
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.739
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.797
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.820
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.836
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.836
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.789
P51115 Xenopus laevis P51115 I 0.781
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.773