KHSRP (Myotis lucifugus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMLUG00000015543 T19047_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.848
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.848
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.848
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.848
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000014169 KH 100 125
ENSMLUP00000014169 KH 152 216
ENSMLUP00000014169 KH 241 303
ENSMLUP00000014169 KH 343 408

Links

Other KH family RBPs
Other Myotis lucifugus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_439399 Phytophthora sojae s_439399 N 0.000
s_439439 Phytophthora sojae s_439439 N 0.000
s_441375 Phytophthora sojae s_441375 N 0.000
s_443293 Phytophthora sojae s_443293 N 0.000
s_444614 Phytophthora sojae s_444614 N 0.000
s_445357 Phytophthora sojae s_445357 N 0.000
s_445365 Phytophthora sojae s_445365 N 0.000
s_447446 Phytophthora sojae s_447446 N 0.000
s_448031 Phytophthora sojae s_448031 N 0.000
s_448313 Phytophthora sojae s_448313 N 0.000
s_449144 Phytophthora sojae s_449144 N 0.000
s_449190 Phytophthora sojae s_449190 N 0.000
s_449199 Phytophthora sojae s_449199 N 0.000
s_449341 Phytophthora sojae s_449341 N 0.000
s_450243 Phytophthora sojae s_450243 N 0.000
s_450687 Phytophthora sojae s_450687 N 0.000
s_450711 Phytophthora sojae s_450711 N 0.000
s_450906 Phytophthora sojae s_450906 N 0.000
s_452288 Phytophthora sojae s_452288 N 0.000
s_452631 Phytophthora sojae s_452631 N 0.000
s_452859 Phytophthora sojae s_452859 N 0.000
s_452881 Phytophthora sojae s_452881 N 0.000
s_456718 Phytophthora sojae s_456718 N 0.000
s_459630 Phytophthora sojae s_459630 N 0.000
s_460521 Phytophthora sojae s_460521 N 0.000
s_462937 Phytophthora sojae s_462937 N 0.000
s_464769 Phytophthora sojae s_464769 N 0.000
s_464794 Phytophthora sojae s_464794 N 0.000
s_466510 Phytophthora sojae s_466510 N 0.000
s_466924 Phytophthora sojae s_466924 N 0.000
s_467750 Phytophthora sojae s_467750 N 0.000
s_468458 Phytophthora sojae s_468458 N 0.000
s_469883 Phytophthora sojae s_469883 N 0.000
s_470592 Phytophthora sojae s_470592 N 0.000
s_472467 Phytophthora sojae s_472467 N 0.000
s_472860 Phytophthora sojae s_472860 N 0.000
s_473273 Phytophthora sojae s_473273 N 0.000
s_476188 Phytophthora sojae s_476188 N 0.000
s_476468 Phytophthora sojae s_476468 N 0.000
s_477289 Phytophthora sojae s_477289 N 0.000
s_477533 Phytophthora sojae s_477533 N 0.000
s_477577 Phytophthora sojae s_477577 N 0.000
s_516788 Phytophthora sojae s_516788 N 0.000