KHSRP (Echinops telfairi)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSETEG00000004793 T18749_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.891
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.891
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.891
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.891
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000003919 KH 104 166
ENSETEP00000003919 KH 218 257
ENSETEP00000003919 KH 282 344
ENSETEP00000003919 KH 384 449

Links

Other KH family RBPs
Other Echinops telfairi RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.914
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.891
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.891
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.891
KHSRP Sus scrofa ENSSSCG00000013538 I 0.891
KHSRP Felis catus ENSFCAG00000003731 I 0.891
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.891
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.891
LOC505564 Bos taurus ENSBTAG00000021018 I 0.891
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.891
LOC100065608 Equus caballus ENSECAG00000018305 I 0.891
KHSRP Homo sapiens ENSG00000088247 D 0.891
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.891
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.891
KHSRP Canis familiaris ENSCAFG00000018667 I 0.891
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.891
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.887
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.887
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.887
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.887
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.887
Khsrp Mus musculus ENSMUSG00000007670 I 0.887
KHSRP Microcebus murinus ENSMICG00000007863 I 0.879
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.844
AAN77160 Xenopus laevis AAN77160 I 0.825
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.825
AAI69923 Xenopus laevis AAI69923 I 0.825
AAI61696 Xenopus laevis AAI61696 I 0.821
KHSRP Danio rerio ENSDARG00000026489 I 0.821
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.797
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.787
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.783
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.770
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.767
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.743
KHSRP Procavia capensis ENSPCAG00000000246 I 0.739
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.728
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.720
KHSRP Oryzias latipes ENSORLG00000011882 I 0.716