KHSRP (Macropus eugenii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMEUG00000016601 T18970_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.953
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.953
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.953
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.953
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000015178 KH 146 208
ENSMEUP00000015178 KH 235 299
ENSMEUP00000015178 KH 324 386
ENSMEUP00000015178 KH 426 491

Links

Other KH family RBPs
Other Macropus eugenii RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHSRP Sus scrofa ENSSSCG00000013538 I 0.953
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.953
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.953
LOC100065608 Equus caballus ENSECAG00000018305 I 0.953
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.953
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.953
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.953
LOC505564 Bos taurus ENSBTAG00000021018 I 0.953
KHSRP Canis familiaris ENSCAFG00000018667 I 0.953
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.953
KHSRP Felis catus ENSFCAG00000003731 I 0.953
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.953
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.953
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.953
KHSRP Homo sapiens ENSG00000088247 D 0.953
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.949
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.949
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.949
Khsrp Mus musculus ENSMUSG00000007670 I 0.949
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.949
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.946
KHSRP Microcebus murinus ENSMICG00000007863 I 0.938
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.903
AAI69923 Xenopus laevis AAI69923 I 0.879
AAN77160 Xenopus laevis AAN77160 I 0.879
AAI61696 Xenopus laevis AAI61696 I 0.875
KHSRP Danio rerio ENSDARG00000026489 I 0.872
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.858
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.845
KHSRP Echinops telfairi ENSETEG00000004793 I 0.844
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.825
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.825
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.809
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.802
KHSRP Procavia capensis ENSPCAG00000000246 I 0.798
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.790
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.774
KHSRP Oryzias latipes ENSORLG00000011882 I 0.770
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.767
FUBP1 Homo sapiens ENSG00000162613 I 0.732
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.732
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.732
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.732
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.732
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.728
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.728
FUBP1 Equus caballus ENSECAG00000010867 I 0.728
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.728
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.728
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.728
Fubp1 Mus musculus ENSMUSG00000028034 I 0.728
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.728
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.728
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.728
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.728
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.728
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.728
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.728
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.728
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.728
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.725
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.724
KHSRP Vicugna pacos ENSVPAG00000010837 I 0.720
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.720
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.720
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.720
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.718
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.716
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.712
AAH44277 Xenopus laevis AAH44277 I 0.708
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.707
AAH70981 Xenopus laevis AAH70981 I 0.704
AAI69815 Xenopus laevis AAI69815 I 0.704