ENSPPYG00000019172 (Pongo pygmaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPPYG00000019172 T19353_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.856
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.856
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.856
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000021481 KH 64 126
ENSPPYP00000021481 KH 156 216
ENSPPYP00000021481 KH 241 303
ENSPPYP00000021481 KH 341 406

Links

Other KH family RBPs
Other Pongo pygmaeus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHSRP Canis familiaris ENSCAFG00000018667 I 0.856
LOC505564 Bos taurus ENSBTAG00000021018 I 0.856
KHSRP Homo sapiens ENSG00000088247 D 0.856
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.856
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.856
LOC100065608 Equus caballus ENSECAG00000018305 I 0.856
KHSRP Felis catus ENSFCAG00000003731 I 0.856
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.856
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.856
KHSRP Sus scrofa ENSSSCG00000013538 I 0.856
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.856
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.856
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.856
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.856
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.856
Khsrp Mus musculus ENSMUSG00000007670 I 0.852
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.852
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.852
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.852
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.852
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.852
KHSRP Microcebus murinus ENSMICG00000007863 I 0.844
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.809
AAI69923 Xenopus laevis AAI69923 I 0.794
AAN77160 Xenopus laevis AAN77160 I 0.794
AAI61696 Xenopus laevis AAI61696 I 0.790
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.790
KHSRP Danio rerio ENSDARG00000026489 I 0.790
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.785
KHSRP Echinops telfairi ENSETEG00000004793 I 0.783
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.760
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.759
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.751
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.740
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.724
KHSRP Procavia capensis ENSPCAG00000000246 I 0.720
KHSRP Oryzias latipes ENSORLG00000011882 I 0.708
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.700