KHSRP (Procavia capensis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPCAG00000000246 T19302_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.844
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.844
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.844
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.844
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000000233 KH 183 208
ENSPCAP00000000233 KH 235 299
ENSPCAP00000000233 KH 324 386
ENSPCAP00000000233 KH 426 491

Links

Other KH family RBPs
Other Procavia capensis RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.986
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.931
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.861
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.848
LOC100065608 Equus caballus ENSECAG00000018305 I 0.844
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.844
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.844
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.844
KHSRP Felis catus ENSFCAG00000003731 I 0.844
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.844
KHSRP Homo sapiens ENSG00000088247 D 0.844
KHSRP Canis familiaris ENSCAFG00000018667 I 0.844
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.844
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.844
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.844
KHSRP Sus scrofa ENSSSCG00000013538 I 0.844
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.844
LOC505564 Bos taurus ENSBTAG00000021018 I 0.844
Khsrp Mus musculus ENSMUSG00000007670 I 0.840
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.840
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.840
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.840
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.837
KHSRP Microcebus murinus ENSMICG00000007863 I 0.829
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.798
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.778
AAN77160 Xenopus laevis AAN77160 I 0.774
AAI69923 Xenopus laevis AAI69923 I 0.774
AAI61696 Xenopus laevis AAI61696 I 0.770
KHSRP Danio rerio ENSDARG00000026489 I 0.767
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.759
KHSRP Echinops telfairi ENSETEG00000004793 I 0.739
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.739
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.720
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.720