KHSRP (Myotis lucifugus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMLUG00000015543 T19047_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.848
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.848
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.848
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.848
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000014169 KH 100 125
ENSMLUP00000014169 KH 152 216
ENSMLUP00000014169 KH 241 303
ENSMLUP00000014169 KH 343 408

Links

Other KH family RBPs
Other Myotis lucifugus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHSRP Procavia capensis ENSPCAG00000000246 I 0.986
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.935
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.865
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.848
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.848
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.848
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.848
KHSRP Sus scrofa ENSSSCG00000013538 I 0.848
LOC505564 Bos taurus ENSBTAG00000021018 I 0.848
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.848
LOC100065608 Equus caballus ENSECAG00000018305 I 0.848
KHSRP Homo sapiens ENSG00000088247 D 0.848
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.848
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.848
KHSRP Canis familiaris ENSCAFG00000018667 I 0.848
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.848
KHSRP Felis catus ENSFCAG00000003731 I 0.848
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.844
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.844
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.844
Khsrp Mus musculus ENSMUSG00000007670 I 0.844
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.844
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.840
KHSRP Microcebus murinus ENSMICG00000007863 I 0.833
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.802
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.782
AAI69923 Xenopus laevis AAI69923 I 0.778
AAN77160 Xenopus laevis AAN77160 I 0.778
AAI61696 Xenopus laevis AAI61696 I 0.774
KHSRP Danio rerio ENSDARG00000026489 I 0.767
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.766
KHSRP Echinops telfairi ENSETEG00000004793 I 0.743
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.743
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.724
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.720