AAI61696 (Xenopus laevis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AAI61696 T22141_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.922
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.922
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.922
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.922
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAI61696 KH 95 157
AAI61696 KH 183 247
AAI61696 KH 276 338
AAI61696 KH 377 442

Links

Other KH family RBPs
Other Xenopus laevis RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI69923 Xenopus laevis AAI69923 I 0.981
AAN77160 Xenopus laevis AAN77160 I 0.981
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.926
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.922
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.922
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.922
LOC100065608 Equus caballus ENSECAG00000018305 I 0.922
KHSRP Felis catus ENSFCAG00000003731 I 0.922
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.922
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.922
KHSRP Homo sapiens ENSG00000088247 D 0.922
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.922
Khsrp Mus musculus ENSMUSG00000007670 I 0.922
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.922
LOC505564 Bos taurus ENSBTAG00000021018 I 0.922
KHSRP Sus scrofa ENSSSCG00000013538 I 0.922
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.922
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.922
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.922
KHSRP Canis familiaris ENSCAFG00000018667 I 0.922
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.918
KHSRP Microcebus murinus ENSMICG00000007863 I 0.918
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.918
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.914
KHSRP Danio rerio ENSDARG00000026489 I 0.891
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.891
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.875
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.860
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.852
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.848
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.847
KHSRP Echinops telfairi ENSETEG00000004793 I 0.821
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.814
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.809
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.802
KHSRP Oryzias latipes ENSORLG00000011882 I 0.798
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.790
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.774
KHSRP Procavia capensis ENSPCAG00000000246 I 0.770
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.751
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.751
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.751
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.751
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.751
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.751
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.751
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.751
FUBP1 Equus caballus ENSECAG00000010867 I 0.751
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.751
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.751
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.751
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.751
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.751
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.751
Fubp1 Mus musculus ENSMUSG00000028034 I 0.751
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.751
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.751
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.749
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.748
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.747
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.747
FUBP1 Homo sapiens ENSG00000162613 I 0.747
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.747
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.747
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.747
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.747
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.743
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.743
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.738
AAH70981 Xenopus laevis AAH70981 I 0.735
AAI69815 Xenopus laevis AAI69815 I 0.735
AAH44277 Xenopus laevis AAH44277 I 0.732
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.732
fubp1 Danio rerio ENSDARG00000029248 I 0.724
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.720
AAN77161 Xenopus laevis AAN77161 I 0.716
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.714
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.707
KHSRP Vicugna pacos ENSVPAG00000010837 I 0.704