ENSCJAG00000016247 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000016247 T35633_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.887
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.746
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000029902 RRM 10 80

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70649 Xenopus laevis AAH70649 I 0.817
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.887
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.704
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.887
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.789
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.887
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.789
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.875
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.887
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.789
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.817
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.887
RBMX Cavia porcellus ENSCPOG00000012164 I 0.887
rbmx Danio rerio ENSDARG00000014244 I 0.732
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.845
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.887
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.789
LOC100054583 Equus caballus ENSECAG00000021380 I 0.887
RBMX Felis catus ENSFCAG00000004779 I 0.789
RBMX Homo sapiens ENSG00000147274 D 0.887
RBMY1F Homo sapiens ENSG00000169800 I 0.718
RBMXL2 Homo sapiens ENSG00000170748 I 0.845
RBMXL3 Homo sapiens ENSG00000175718 I 0.732
RBMXL1 Homo sapiens ENSG00000213516 I 0.859
RBMY1J Homo sapiens ENSG00000226941 I 0.718
RBMY1A1 Homo sapiens ENSG00000234414 D 0.732
RBMY1E Homo sapiens ENSG00000242389 I 0.732
RBMY1B Homo sapiens ENSG00000242875 I 0.732
RBMY1D Homo sapiens ENSG00000244395 I 0.732
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.789
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.887
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.859
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.718
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.887
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.887
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.775
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.775
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.873
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.817
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.817
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.887
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.887
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.887
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.817
Rbmx Mus musculus ENSMUSG00000031134 I 0.887
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.873
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.873
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.789
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.887
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.887
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.817
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.887
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.887
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.789
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.859
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.859
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.887
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.859
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.845
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.845
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.746
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.732
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.746
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.746
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.746
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.746
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.746
RBMX Pan troglodytes ENSPTRG00000034071 I 0.859
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.887
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.859
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.761
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.859
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.887
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.775
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.887
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.761
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.775
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.873
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.761
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.887
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.775
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.887