ppie (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000059270 T36187_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000076776 RRM 8 78

Links

Other RRM family RBPs
Other Danio rerio RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL007273 Aedes aegypti AAEL007273 N 0.000
AAEL013948 Aedes aegypti AAEL013948 N 0.732
AAI23372 Xenopus laevis AAI23372 N 0.915
AGAP009810 Anopheles gambiae AGAP009810 N 0.746
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.887
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.887
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.859
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.887
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.718
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.718
PPIE Anolis carolinensis ENSACAG00000002688 N 0.972
PPIE Canis familiaris ENSCAFG00000003031 N 0.958
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.958
PPIE Cavia porcellus ENSCPOG00000007365 N 0.944
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.958
LOC100054084 Equus caballus ENSECAG00000008955 N 0.958
LOC100054282 Equus caballus ENSECAG00000024285 N 0.958
PPIE Homo sapiens ENSG00000084072 N 0.958
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.958
PPIE Gallus gallus ENSGALG00000013383 N 0.972
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.958
PPIE Loxodonta africana ENSLAFG00000028312 N 0.958
PPIE Microcebus murinus ENSMICG00000016676 N 0.958
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.958
PPIE Macaca mulatta ENSMMUG00000018869 N 0.958
PPIE Monodelphis domestica ENSMODG00000017659 N 0.972
Ppie Mus musculus ENSMUSG00000028651 N 0.958
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.972
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.958
PPIE Oryzias latipes ENSORLG00000017469 N 0.972
PPIE Pan troglodytes ENSPTRG00000000577 N 0.958
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.958
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.958
PPIE Sorex araneus ENSSARG00000005703 N 0.958
PPIE Sus scrofa ENSSSCG00000003664 N 0.958
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.972
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.944
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.944
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.958
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.873
cyp33 Drosophila melanogaster FBgn0028382 N 0.732
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.732
GF11346 Drosophila ananassae FBgn0088386 N 0.718
GG21795 Drosophila erecta FBgn0113973 N 0.718
GI20843 Drosophila mojavensis FBgn0143577 N 0.732
GL11464 Drosophila persimilis FBgn0149073 N 0.732
GM21798 Drosophila sechellia FBgn0176676 N 0.718
GD11288 Drosophila simulans FBgn0183037 N 0.732
GJ20579 Drosophila virilis FBgn0207718 N 0.732
GK21899 Drosophila willistoni FBgn0223884 N 0.732
GE11871 Drosophila yakuba FBgn0229657 N 0.732
ISCW002449 Ixodes scapularis ISCW002449 N 0.873
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.817
PHUM293600 Pediculus humanus PHUM293600 N 0.887
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.873
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.873