amel4_ncbi_hmm1701 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm1701 T31863_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm1701 RRM 9 79

Links

Other RRM family RBPs
Other Apis mellifera RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 1.000
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.958
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.930
PHUM293600 Pediculus humanus PHUM293600 N 0.901
ISCW002449 Ixodes scapularis ISCW002449 N 0.901
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.901
PPIE Monodelphis domestica ENSMODG00000017659 N 0.887
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.887
PPIE Oryzias latipes ENSORLG00000017469 N 0.887
ppie Danio rerio ENSDARG00000059270 N 0.887
PPIE Anolis carolinensis ENSACAG00000002688 N 0.887
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.887
PPIE Gallus gallus ENSGALG00000013383 N 0.887
PPIE Microcebus murinus ENSMICG00000016676 N 0.873
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.873
Ppie Mus musculus ENSMUSG00000028651 N 0.873
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.873
PPIE Macaca mulatta ENSMMUG00000018869 N 0.873
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.873
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.873
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.873
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.873
PPIE Sus scrofa ENSSSCG00000003664 N 0.873
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.873
PPIE Loxodonta africana ENSLAFG00000028312 N 0.873
PPIE Pan troglodytes ENSPTRG00000000577 N 0.873
PPIE Sorex araneus ENSSARG00000005703 N 0.873
LOC100054084 Equus caballus ENSECAG00000008955 N 0.873
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.873
PPIE Canis familiaris ENSCAFG00000003031 N 0.873
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.873
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.873
LOC100054282 Equus caballus ENSECAG00000024285 N 0.873
PPIE Homo sapiens ENSG00000084072 N 0.873
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.873
PPIE Cavia porcellus ENSCPOG00000007365 N 0.861
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.845
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.845
AAI23372 Xenopus laevis AAI23372 N 0.845
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.845
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.845
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.845
PPIE Felis catus ENSFCAG00000006027 N 0.831
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.831
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.817
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.817
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.817
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.817
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.803
107863 Helobdella robusta 107863 N 0.803
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.789
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.789
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.775
AAEL013948 Aedes aegypti AAEL013948 N 0.775
AGAP009810 Anopheles gambiae AGAP009810 N 0.775
Bm1_52100 Brugia malayi Bm1_52100 N 0.775
LOAG_00807 Loa loa LOAG_00807 N 0.775
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.775
GD11288 Drosophila simulans FBgn0183037 N 0.761
cyp33 Drosophila melanogaster FBgn0028382 N 0.761
PASA_GEN_6900014 Daphnia pulex PASA_GEN_6900014 N 0.750
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.746
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.746
GM21798 Drosophila sechellia FBgn0176676 N 0.746
GL11464 Drosophila persimilis FBgn0149073 N 0.746
GI20843 Drosophila mojavensis FBgn0143577 N 0.746
GH20760 Drosophila grimshawi FBgn0128223 N 0.746
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.746
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.746
GJ20579 Drosophila virilis FBgn0207718 N 0.746
GK21899 Drosophila willistoni FBgn0223884 N 0.746
GE11871 Drosophila yakuba FBgn0229657 N 0.746
PPIE Macropus eugenii ENSMEUG00000005090 N 0.736
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.732
CRE28739 Caenorhabditis remanei CRE28739 N 0.732
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.732
GG21795 Drosophila erecta FBgn0113973 N 0.732
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.732
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.732
GF11346 Drosophila ananassae FBgn0088386 N 0.732
CJA08769 Caenorhabditis japonica CJA08769 N 0.718
CBG00420 Caenorhabditis briggsae CBG00420 N 0.718
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.718
CBN02296 Caenorhabditis brenneri CBN02296 N 0.718