PHUM293600 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM293600 T45342_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM293600-PA RRM 9 79

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

81 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.915
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.915
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.901
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.901
PPIE Anolis carolinensis ENSACAG00000002688 N 0.901
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.901
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.901
PPIE Oryzias latipes ENSORLG00000017469 N 0.887
PPIE Monodelphis domestica ENSMODG00000017659 N 0.887
ppie Danio rerio ENSDARG00000059270 N 0.887
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.887
PPIE Gallus gallus ENSGALG00000013383 N 0.887
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.873
LOC100054084 Equus caballus ENSECAG00000008955 N 0.873
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.873
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.873
PPIE Loxodonta africana ENSLAFG00000028312 N 0.873
PPIE Homo sapiens ENSG00000084072 N 0.873
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.873
Ppie Mus musculus ENSMUSG00000028651 N 0.873
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.873
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.873
PPIE Sorex araneus ENSSARG00000005703 N 0.873
PPIE Sus scrofa ENSSSCG00000003664 N 0.873
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.873
PPIE Pan troglodytes ENSPTRG00000000577 N 0.873
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.873
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.873
PPIE Macaca mulatta ENSMMUG00000018869 N 0.873
PPIE Canis familiaris ENSCAFG00000003031 N 0.873
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.873
PPIE Microcebus murinus ENSMICG00000016676 N 0.873
LOC100054282 Equus caballus ENSECAG00000024285 N 0.873
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.873
PPIE Cavia porcellus ENSCPOG00000007365 N 0.861
AAI23372 Xenopus laevis AAI23372 N 0.859
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.859
ISCW002449 Ixodes scapularis ISCW002449 N 0.859
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.859
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.845
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.845
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.845
PPIE Felis catus ENSFCAG00000006027 N 0.831
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.817
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.817
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.817
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.817
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.803
107863 Helobdella robusta 107863 N 0.789
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.789
cyp33 Drosophila melanogaster FBgn0028382 N 0.775
GD11288 Drosophila simulans FBgn0183037 N 0.775
GH20760 Drosophila grimshawi FBgn0128223 N 0.761
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.761
GI20843 Drosophila mojavensis FBgn0143577 N 0.761
GL11464 Drosophila persimilis FBgn0149073 N 0.761
GJ20579 Drosophila virilis FBgn0207718 N 0.761
GM21798 Drosophila sechellia FBgn0176676 N 0.761
GK21899 Drosophila willistoni FBgn0223884 N 0.761
GE11871 Drosophila yakuba FBgn0229657 N 0.761
AAEL013948 Aedes aegypti AAEL013948 N 0.761
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.746
LOAG_00807 Loa loa LOAG_00807 N 0.746
GG21795 Drosophila erecta FBgn0113973 N 0.746
Bm1_52100 Brugia malayi Bm1_52100 N 0.746
AGAP009810 Anopheles gambiae AGAP009810 N 0.746
GF11346 Drosophila ananassae FBgn0088386 N 0.746
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.746
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.732
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.732
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.732
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.732
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.732
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.732
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.732
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.732
PPIE Macropus eugenii ENSMEUG00000005090 N 0.722
PASA_GEN_6900014 Daphnia pulex PASA_GEN_6900014 N 0.722
CBN02296 Caenorhabditis brenneri CBN02296 N 0.718
CRE28739 Caenorhabditis remanei CRE28739 N 0.704
Smp_094810 Schistosoma mansoni Smp_094810 N 0.704